RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 PCBP2Q15366 365 aaKnown RBP eCLIP9.95□□□□□ -0.82
DDX41-203ENST00000504781 PFKFB4Q16877 469 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 UNC50Q53HI1 259 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 METTL21CQ5VZV1 264 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 SEL1L3Q68CR1 1132 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 SBSNQ6UWP8 590 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 KIAA1324Q6UXG2 1013 aaKnown RBP9.95□□□□□ -0.82
DDX41-203ENST00000504781 DET1Q7L5Y6 550 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 LSMEM2Q8N112 164 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 PELI3Q8N2H9 469 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 TCAIMQ8N3R3 496 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 AFAP1L2Q8N4X5 818 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 CAMKK1Q8N5S9 505 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 GBP7Q8N8V2 638 aaPredicted RBP9.95□□□□□ -0.82
DDX41-203ENST00000504781 PLA2G15Q8NCC3 412 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 PDPRQ8NCN5 879 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 OR2L2Q8NH16 312 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 FAM174AQ8TBP5 190 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 LKAAEAR1Q8TD35 194 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 TMEM159Q96B96 161 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 ERLEC1Q96DZ1 483 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
DDX41-203ENST00000504781 FOPNLQ96NB1 174 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 IER2Q9BTL4 223 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 TUBB6Q9BUF5 446 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 APOOQ9BUR5 198 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 UNKQ9C0B0 810 aaKnown RBP9.95□□□□□ -0.82
DDX41-203ENST00000504781 SLC6A17Q9H1V8 727 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 OR2AG1Q9H205 316 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 DPEP2Q9H4A9 486 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
DDX41-203ENST00000504781 NPHS2Q9NP85 383 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 MBNL1Q9NR56 388 aaKnown RBP9.95□□□□□ -0.82
DDX41-203ENST00000504781 CD274Q9NZQ7 290 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 EBF1Q9UH73 591 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 DNAJC16Q9Y2G8 782 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 STK38LQ9Y2H1 464 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 R4GN57 208 aa9.95□□□□□ -0.82
DDX41-203ENST00000504781 NPEPPSL1A6NEC2 478 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 NEMP2A6NFY4 417 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 OR2AG2A6NM03 316 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 MATN2O00339 956 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 FPGTO14772 594 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 HDAC3O15379 428 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 FFAR2O15552 330 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 APBB3O95704 486 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 ZNF8P17098 575 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 CYP2A7P20853 494 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 TARSP26639 723 aaKnown RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 ACSL1P33121 698 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 HK3P52790 923 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 CTSCP53634 463 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 AP1S2P56377 157 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 YPEL5P62699 121 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 ARHGAP8P85298 464 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 PPP1R3AQ16821 1122 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 ZNF658BQ4V348 819 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 SPDYAQ5MJ70 313 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 ZNF648Q5T619 568 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 FRMD7Q6ZUT3 714 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 FRA10AC1Q70Z53 315 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 TRPM8Q7Z2W7 1104 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 AMZ2Q86W34 360 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 HEATR4Q86WZ0 1026 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 C1orf210Q8IVY1 113 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 CFAP206Q8IYR0 622 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 SLC22A15Q8IZD6 547 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 CLYBLQ8N0X4 340 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 PGBD3Q8N328 593 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 SPEM1Q8N4L4 309 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 PTGR2Q8N8N7 351 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 FBXO15Q8NCQ5 510 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 PJA1Q8NG27 643 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 RFWD2Q8NHY2 731 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 MAGEC3Q8TD91 643 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 C10orf82Q8WW14 230 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 GLMNQ92990 594 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 SCARF2Q96GP6 870 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 WWP1Q9H0M0 922 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 PCED1AQ9H1Q7 454 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 GSTO2Q9H4Y5 243 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 WDR26Q9H7D7 661 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 PFDN4Q9NQP4 134 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 PNPOQ9NVS9 261 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 SPATA6Q9NWH7 488 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 DNAJC28Q9NX36 388 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 MBD1Q9UIS9 605 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 IKZF3Q9UKT9 509 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 DMTF1Q9Y222 760 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 MTF2Q9Y483 593 aaPredicted RBP9.94□□□□□ -0.82
DDX41-203ENST00000504781 MYO15AQ9UKN7 3530 aa9.94□□□□□ -0.82
DDX41-203ENST00000504781 PABPN1LA6NDY0 278 aaKnown RBP9.93□□□□□ -0.82
DDX41-203ENST00000504781 TRPC5OSA6NMA1 111 aa9.93□□□□□ -0.82
DDX41-203ENST00000504781 TNFRSF10CO14798 259 aa9.93□□□□□ -0.82
DDX41-203ENST00000504781 GRID2O43424 1007 aa9.93□□□□□ -0.82
DDX41-203ENST00000504781 LATO43561 262 aa9.93□□□□□ -0.82
DDX41-203ENST00000504781 CCDC22O60826 627 aa9.93□□□□□ -0.82
DDX41-203ENST00000504781 PSIP1O75475 530 aaKnown RBP9.93□□□□□ -0.82
DDX41-203ENST00000504781 LYPLA1O75608 230 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms