RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ERLEC1Q96DZ1 483 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 IGSF21Q96ID5 467 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CNDP2Q96KP4 475 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PRMT6Q96LA8 375 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 FAM81BQ96LP2 452 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SLC22A12Q96S37 553 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 C1QTNF4Q9BXJ3 329 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 MRPL9Q9BYD2 267 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 RAB6CQ9H0N0 254 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZCCHC17Q9NP64 241 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 MRGBPQ9NV56 204 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GDE1Q9NZC3 331 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CRNNQ9UBG3 495 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 GAGE2DQ9UEU5 116 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ANAPC2Q9UJX6 822 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 POU2F3Q9UKI9 436 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 RALYQ9UKM9 306 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 WBP11Q9Y2W2 641 aaKnown RBP2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 ZNF711Q9Y462 761 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 YIPF1Q9Y548 306 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 PCDHAC2Q9Y5I4 1007 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 SNX5Q9Y5X3 404 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 TAF1P21675 1872 aa2.34□□□□□ -2.03
HMGB1P35-201ENST00000503360 CGNL1Q0VF96 1302 aa2.34□□□□□ -2.04
HMGB1P35-201ENST00000503360 GTPBP10A4D1E9 387 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRIM64A6NGJ6 449 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRIM64BA6NI03 449 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 ANKRD66B4E2M5 251 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TO15178 435 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 BUD23O43709 281 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 SSX4O60224 188 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 WDR1O75083 606 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TBCAO75347 108 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 HSPA4LO95757 839 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 KRT19P08727 400 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 ATP6V1B1P15313 513 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 MUTP22033 750 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 HOXC13P31276 330 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 ARCN1P48444 511 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCR3P51677 355 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 FUT6P51993 359 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 PLA2G7Q13093 441 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 ALCAMQ13740 583 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 KYNUQ16719 465 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 CBWD6Q4V339 395 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 CBWD3Q5JTY5 395 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 STXBP5Q5T5C0 1151 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 C6orf163Q5TEZ5 329 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 WBP2NLQ6ICG8 309 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 FAM171BQ6P995 826 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 FIGLAQ6QHK4 219 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 PLEKHM3Q6ZWE6 761 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TUBA1AQ71U36 451 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 GALNTL5Q7Z4T8 443 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 CAMKMTQ7Z624 323 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 MUC20Q8N307 709 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 AFAP1Q8N556 730 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF713Q8N859 430 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TDRD5Q8NAT2 981 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 MSANTD4Q8NCY6 345 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 CFAP61Q8NHU2 1237 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TEKT4Q8WW24 435 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 SORCS1Q8WY21 1168 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 SEMA4DQ92854 862 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 SECISBP2LQ93073 1101 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 PGAP3Q96FM1 320 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 OXNAD1Q96HP4 312 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 ZNF582Q96NG8 517 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 IL17FQ96PD4 163 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 DUX5Q96PT3 197 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 NEK1Q96PY6 1258 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 OR6C1Q96RD1 312 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TUBA1CQ9BQE3 449 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 NEURL2Q9BR09 285 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 MOV10L1Q9BXT6 1211 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 EDEM3Q9BZQ6 932 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 RABEP2Q9H5N1 569 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 SLA2Q9H6Q3 261 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 DDX31Q9H8H2 851 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 DBNDD1Q9H9R9 158 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 EBF2Q9HAK2 575 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 HHATLQ9HCP6 504 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRPC7Q9HCX4 862 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 CCDC177Q9NQR7 707 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 MBNL1Q9NR56 388 aaKnown RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 OLAHQ9NV23 265 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 HAO2Q9NYQ3 351 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 WDR35Q9P2L0 1181 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 DLGAP4Q9Y2H0 992 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 ASTN2O75129 1339 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 SNED1Q8TER0 1413 aa2.33□□□□□ -2.04
HMGB1P35-201ENST00000503360 PRSS51A0A1B0GVH4 220 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TCRBV21S2A2A0A5A6 115 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 TRBC2A0A5B9 178 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 ASPDHA6ND91 283 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 URADA6NGE7 173 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 C15orf62A8K5M9 175 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 HEPACAM2A8MVW5 462 aa2.32□□□□□ -2.04
HMGB1P35-201ENST00000503360 PRAC2D3DTV9 90 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms