RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SGCAQ16586 387 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 VARS2Q5ST30 1063 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 OTUD3Q5T2D3 398 aaPredicted RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PDE12Q6L8Q7 609 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZFP1Q6P2D0 407 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 C15orf39Q6ZRI6 1047 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CMC1Q7Z7K0 106 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF677Q86XU0 584 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TBC1D21Q8IYX1 336 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ABI1Q8IZP0 508 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CNTD1Q8N815 330 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SIMC1Q8NDZ2 872 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RHOXF1Q8NHV9 184 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RAB2BQ8WUD1 216 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 NKD2Q969F2 451 aaPredicted RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ALKBH8Q96BT7 664 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZHX1-C8orf76Q96EF9 292 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 BDH2Q9BUT1 245 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 REXO4Q9GZR2 422 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 IL1RL2Q9HB29 575 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ERVK13-1Q9NX77 482 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 GLTPQ9NZD2 209 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TEX264Q9Y6I9 313 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RNF103-CHMP3A0A140T963 221 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 IQANK1A0A1B0GTG1 560 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RGSL1A5PLK6 1076 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 H3BQ06 376 aaPredicted RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 I3L521 148 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 DFFAO00273 331 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CST8O60676 142 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TSC22D2O75157 780 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 DAB1O75553 588 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CYP7B1O75881 506 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PDGFAP04085 211 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 POLBP06746 335 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ALOX12P18054 663 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 GRK4P32298 578 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 HNF1BP35680 557 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PIGAP37287 484 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RPL35P42766 123 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 EIF1AXP47813 144 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 NME5P56597 212 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 INCA1Q0VD86 236 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PARP15Q460N3 678 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CCDC14Q49A88 953 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SETMARQ53H47 684 aaPredicted RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 FSCBQ5H9T9 825 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 MARCH8Q5T0T0 291 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SH3PXD2AQ5TCZ1 1133 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TMEM81Q6P7N7 255 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 DPY19L3Q6ZPD9 716 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 BNIPLQ7Z465 357 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TRIM48Q8IWZ4 208 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 UBQLNLQ8IYU4 475 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 DYNC2LI1Q8TCX1 351 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ASB12Q8WXK4 309 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PYCR2Q96C36 320 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SHDQ96IW2 340 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TSNARE1Q96NA8 513 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SLITRK1Q96PX8 696 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SERPINI1Q99574 410 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 WDR12Q9GZL7 423 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CPNE5Q9HCH3 593 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 EIF3KQ9UBQ5 218 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ADGRE2Q9UHX3 823 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TBC1D24Q9ULP9 559 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 NOSIPQ9Y314 301 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 E7ESA3 106 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 H0YJX3 145 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PRPSAP2O60256 369 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 PPM1BO75688 479 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SEC24AO95486 1093 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 KRT6AP02538 564 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 KRT6BP04259 564 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CYBBP04839 570 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 HOXD4P09016 255 aaPredicted RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 DARSP14868 501 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 NCK1P16333 377 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 LMO2P25791 158 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ASPAP45381 313 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 SCNN1GP51170 649 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 HOXC5Q00444 222 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 IRF9Q00978 393 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 FCHO2Q0JRZ9 810 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ACOX1Q15067 660 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ESCO2Q56NI9 601 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 HABP4Q5JVS0 413 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RBM20Q5T481 1227 aaKnown RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 FBXO46Q6PJ61 603 aaPredicted RBP5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 ZNF773Q6PK81 442 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 MON1BQ7L1V2 547 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 OTOP2Q7RTS6 562 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TMEM126BQ8IUX1 230 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 RXFP2Q8WXD0 754 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TESCQ96BS2 214 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 CERS2Q96G23 380 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 DACH2Q96NX9 599 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 XYLT2Q9H1B5 865 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 LRRC4Q9HBW1 653 aa5.7□□□□□ -1.5
SOX2-OT-218ENST00000498731 TNFRSF12AQ9NP84 129 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms