RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 LCN9Q8WX39 176 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 N4BP2L2Q92802 583 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-217ENST00000498519 C5orf34Q96MH7 638 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 FCRL5Q96RD9 977 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 FERMT1Q9BQL6 677 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 NUDT9Q9BW91 350 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 TLR10Q9BXR5 811 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 MFRPQ9BY79 579 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 PCMTD2Q9NV79 361 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 ZNHIT6Q9NWK9 470 aaKnown RBP13.29□□□□□ -0.28
SHANK2-217ENST00000498519 KLHL8Q9P2G9 620 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-217ENST00000498519 TRHDEQ9UKU6 1024 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 POMT2Q9UKY4 750 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 NENFQ9UMX5 172 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 B3GNT3Q9Y2A9 372 aa13.29□□□□□ -0.28
SHANK2-217ENST00000498519 CFAP20Q9Y6A4 193 aaKnown RBP13.29□□□□□ -0.28
SHANK2-217ENST00000498519 C17orf113A0A1B0GUU1 675 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 GSAPA4D1B5 854 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 WIPF3A6NGB9 483 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 SLC9B1P1A6NJY1 282 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-217ENST00000498519 POLR2CP19387 275 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-217ENST00000498519 ITGA1P56199 1179 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 MRPL49Q13405 166 aaKnown RBP13.28□□□□□ -0.28
SHANK2-217ENST00000498519 SSPNQ14714 243 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 IQCB1Q15051 598 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 KDELC1Q6UW63 502 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 HOOK3Q86VS8 718 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 CPNE8Q86YQ8 564 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 SLC25A41Q8N5S1 370 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 ZBTB2Q8N680 514 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 RBMXL3Q8N7X1 1067 aaKnown RBP13.28□□□□□ -0.28
SHANK2-217ENST00000498519 Q8NA96 180 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 SLC35G2Q8TBE7 412 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 P3H4Q92791 437 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 ULK4Q96C45 1275 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 GPN3Q9UHW5 284 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-217ENST00000498519 AP1M2Q9Y6Q5 423 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 CREBBPQ92793 2442 aa13.28□□□□□ -0.28
SHANK2-217ENST00000498519 PRRC2CQ9Y520 2896 aaKnown RBP13.27□□□□□ -0.28
SHANK2-217ENST00000498519 DOPEY1Q5JWR5 2465 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 C5orf60A6NFR6 353 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 C2orf74A8MZ97 194 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 GOLGA6L19H0YKK7 550 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 AKR1B10O60218 316 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 ANXA9O76027 345 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 GYPCP04921 128 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 NFKB1P19838 968 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 PRDX3P30048 256 aaKnown RBP13.27□□□□□ -0.29
SHANK2-217ENST00000498519 ATP1A4Q13733 1029 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 KYNUQ16719 465 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 SARM1Q6SZW1 724 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 IGFL3Q6UXB1 125 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 NPNTQ6UXI9 565 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 DET1Q7L5Y6 550 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 PID1Q7Z2X4 250 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 CFAP206Q8IYR0 622 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 SLC34A3Q8N130 599 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 TTC13Q8NBP0 860 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 IPMKQ8NFU5 416 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 HM13Q8TCT9 377 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.27□□□□□ -0.293e-6■■■■■ 40.9
SHANK2-217ENST00000498519 NACC2Q96BF6 587 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-217ENST00000498519 LRRC45Q96CN5 670 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 SNRNP40Q96DI7 357 aaKnown RBP13.27□□□□□ -0.29
SHANK2-217ENST00000498519 MRGPRX2Q96LB1 330 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 C19orf43Q9BQ61 176 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 PITPNM3Q9BZ71 974 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 ILKAPQ9H0C8 392 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-217ENST00000498519 TFB2MQ9H5Q4 396 aaKnown RBP13.27□□□□□ -0.29
SHANK2-217ENST00000498519 ASB8Q9H765 288 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 AGPAT4Q9NRZ5 378 aa13.27□□□□□ -0.29
SHANK2-217ENST00000498519 ANKUB1A6NFN9 424 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 HACD1B0YJ81 288 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 SPOPO43791 374 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 CST8O60676 142 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 SRP72O76094 671 aaKnown RBP13.26□□□□□ -0.29
SHANK2-217ENST00000498519 CBX6O95503 412 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 CRTAMO95727 393 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 LDLRP01130 860 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 POLBP06746 335 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 GSTM1P09488 218 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 TPM1P09493 284 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 CD68P34810 354 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-217ENST00000498519 CD151P48509 253 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 CENPEQ02224 2701 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 GSTM4Q03013 218 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 WASHC5Q12768 1159 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 ABRQ12979 859 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 TRIM14Q14142 442 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 NR6A1Q15406 480 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 TAF1AQ15573 450 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-217ENST00000498519 PRR30Q53SZ7 412 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-217ENST00000498519 FAM198BQ6UWH4 519 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 ZADH2Q8N4Q0 377 aa13.26□□□□□ -0.29
SHANK2-217ENST00000498519 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-217ENST00000498519 OR8K1Q8NGG5 319 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms