RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 NEMP2A6NFY4 417 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 LMO7DNF2Z398 122 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-227ENST00000498056 KCNJ13O60928 360 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 EML2O95834 649 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 SLC35E2BP0CK96 405 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 ALPPL2P10696 532 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 F3P13726 295 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 SLC2A4P14672 509 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 PDHA2P29803 388 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 GMPRP36959 345 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 IRF9Q00978 393 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 RPA4Q13156 261 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 INAVAQ3KP66 663 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 UAP1L1Q3KQV9 507 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 METRNLQ641Q3 311 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 PIWIL4Q7Z3Z4 852 aaKnown RBP13.28□□□□□ -0.28
CPNE1-227ENST00000498056 TBC1D1Q86TI0 1168 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-227ENST00000498056 TRIM48Q8IWZ4 208 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 SLC22A15Q8IZD6 547 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 IQCKQ8N0W5 287 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-227ENST00000498056 CFAP61Q8NHU2 1237 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 SAP25Q8TEE9 199 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 PATE1Q8WXA2 126 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 ANKRD7Q92527 254 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 C12orf66Q96MD2 445 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 UNKQ9C0B0 810 aaKnown RBP13.28□□□□□ -0.28
CPNE1-227ENST00000498056 RXFP3Q9NSD7 469 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 EURLQ9NYK6 297 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 LGALS13Q9UHV8 139 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 ACSL5Q9ULC5 683 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 CDYLQ9Y232 598 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 WDR37Q9Y2I8 494 aa13.28□□□□□ -0.28
CPNE1-227ENST00000498056 CFAP20Q9Y6A4 193 aaKnown RBP13.28□□□□□ -0.28
CPNE1-227ENST00000498056 PCM1Q15154 2024 aa13.27□□□□□ -0.28
CPNE1-227ENST00000498056 RP1P56715 2156 aa13.27□□□□□ -0.28
CPNE1-227ENST00000498056 A0A096LPK6 155 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 NPEPPSL1A6NEC2 478 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 OR52A4PA6NMU1 304 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 FOXO6A8MYZ6 492 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 GOLGA8RI6L899 631 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 RGS16O15492 202 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-227ENST00000498056 GPC4O75487 556 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 ENO3P13929 434 aaPredicted RBP13.27□□□□□ -0.29
CPNE1-227ENST00000498056 CD9P21926 228 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 CRABP2P29373 138 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 ATP5DP30049 168 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 SKIV2L2P42285 1042 aaKnown RBP13.27□□□□□ -0.29
CPNE1-227ENST00000498056 BDKRB1P46663 353 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 IL2P60568 153 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 CSHL1Q14406 222 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 GBX1Q14549 363 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 LRRC8EQ6NSJ5 796 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 TMEM207Q6UWW9 146 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 KANSL1Q7Z3B3 1105 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 SFTPA2Q8IWL1 248 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 CYP4X1Q8N118 509 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 SLC25A45Q8N413 288 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 KYQ8NBH2 561 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 EEF1AKMT1Q8WVE0 214 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 HGH1Q9BTY7 390 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 TMEM109Q9BVC6 243 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 OR52A5Q9H2C5 316 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 SYTL2Q9HCH5 934 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 NLGN3Q9NZ94 848 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 TLK1Q9UKI8 766 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 FAM186AA6NE01 2351 aa13.27□□□□□ -0.29
CPNE1-227ENST00000498056 TRBV23OR9-2A0A075B6M9 112 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 A0A087X1B8 175 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 A6NCN8 305 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 PRR19A6NJB7 356 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 YY2O15391 372 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 PCDHGA12O60330 932 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 MT-ND3P03897 115 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 C2P06681 752 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 ZNF883P0CG24 379 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 CCDC166P0CW27 439 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 CBSLP0DN79 551 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 MTHFD1P11586 935 aaKnown RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 BRAFP15056 766 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 CBSP35520 551 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 MAGEA12P43365 314 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 MAZP56270 477 aaKnown RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 PLOD1Q02809 727 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 EP300Q09472 2414 aaPredicted RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 BIRC2Q13490 618 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 RASA2Q15283 850 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 C6orf132Q5T0Z8 1188 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 SRRM1Q8IYB3 904 aaKnown RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 CNPY4Q8N129 248 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 SDR16C5Q8N3Y7 309 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 SPATA6LQ8N4H0 392 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
CPNE1-227ENST00000498056 EID2Q8N6I1 236 aa13.26□□□□□ -0.29
CPNE1-227ENST00000498056 ARL10Q8N8L6 244 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms