RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 NKX2-1P43699 371 aaPredicted RBP3.26□□□□□ -1.89
SMC4-227ENST00000497984 MVPQ14764 893 aaKnown RBP3.26□□□□□ -1.89
SMC4-227ENST00000497984 ACSM2BQ68CK6 577 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 PAQR6Q6TCH4 344 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 TPRG1Q6ZUI0 275 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 FASTKD5Q7L8L6 764 aaKnown RBP3.26□□□□□ -1.89
SMC4-227ENST00000497984 PXKQ7Z7A4 578 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 OMA1Q96E52 524 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 MTMR10Q9NXD2 777 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 TRMT1Q9NXH9 659 aaKnown RBP3.26□□□□□ -1.89
SMC4-227ENST00000497984 RCC2Q9P258 522 aaKnown RBP3.26□□□□□ -1.89
SMC4-227ENST00000497984 B3GALT5Q9Y2C3 310 aa3.26□□□□□ -1.89
SMC4-227ENST00000497984 OR6C76A6NM76 312 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 TRIM49P0CI25 452 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 TRIM49CP0CI26 452 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 MAN1A1P33908 653 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 PIK3CAP42336 1068 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 GPR143P51810 404 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 TEAD2Q15562 447 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 FASTKD1Q53R41 847 aaKnown RBP3.25□□□□□ -1.89
SMC4-227ENST00000497984 FAM109BQ6ICB4 259 aaPredicted RBP3.25□□□□□ -1.89
SMC4-227ENST00000497984 JADE1Q6IE81 842 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 TMEM154Q6P9G4 183 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 IL27RAQ6UWB1 636 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 TICAM1Q8IUC6 712 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 CRYBG2Q8N1P7 616 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 ZNF383Q8NA42 475 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 TMEM178AQ8NBL3 297 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 OR2T11Q8NH01 316 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 MOAP1Q96BY2 351 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 CCDC34Q96HJ3 373 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 WDFY2Q96P53 400 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 NCAPGQ9BPX3 1015 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 C1QTNF1Q9BXJ1 281 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 MBNL1Q9NR56 388 aaKnown RBP3.25□□□□□ -1.89
SMC4-227ENST00000497984 OLA1Q9NTK5 396 aaKnown RBP3.25□□□□□ -1.89
SMC4-227ENST00000497984 PIAS3Q9Y6X2 628 aa3.25□□□□□ -1.89
SMC4-227ENST00000497984 ARHGEF40Q8TER5 1519 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 OGG1O15527 345 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 EPB41L2O43491 1005 aaKnown RBP3.24□□□□□ -1.89
SMC4-227ENST00000497984 ZNF217O75362 1048 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 CKMT2P17540 419 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 CCR10P46092 362 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 GAGE2BQ13066 116 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 GRAPQ13588 217 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 EIF4A2Q14240 407 aaKnown RBP3.24□□□□□ -1.89
SMC4-227ENST00000497984 GAGE2EQ4V326 116 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 C2CD6Q53TS8 623 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 RARS2Q5T160 578 aaKnown RBP3.24□□□□□ -1.89
SMC4-227ENST00000497984 LRIF1Q5T3J3 769 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 CYP4A22Q5TCH4 519 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 GAGE2AQ6NT46 116 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 ZNF343Q6P1L6 599 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 PSRC1Q6PGN9 363 aaPredicted RBP3.24□□□□□ -1.89
SMC4-227ENST00000497984 CCDC190Q86UF4 302 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 GPALPP1Q8IXQ4 340 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 Q8N377 158 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 TMTC2Q8N394 836 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 OR8K5Q8NH50 307 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 KCNG4Q8TDN1 519 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 ZFAND2BQ8WV99 257 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 PGAM5Q96HS1 289 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 DACH2Q96NX9 599 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 SEMA6AQ9H2E6 1030 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 SH2D4AQ9H788 454 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 SMC4Q9NTJ3 1288 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 ORC3Q9UBD5 711 aaPredicted RBP3.24□□□□□ -1.89
SMC4-227ENST00000497984 GAGE2DQ9UEU5 116 aa3.24□□□□□ -1.89
SMC4-227ENST00000497984 TMEM8BA6NDV4 472 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 CDRT15L2A8MXV6 281 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 GPC4O75487 556 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 KHDRBS3O75525 346 aaKnown RBP3.23□□□□□ -1.89
SMC4-227ENST00000497984 RNASEH2AO75792 299 aaKnown RBP3.23□□□□□ -1.89
SMC4-227ENST00000497984 CDC123O75794 336 aaPredicted RBP3.23□□□□□ -1.89
SMC4-227ENST00000497984 MBD4O95243 580 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 CD4P01730 458 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 ARL3P36405 182 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 CDH11P55287 796 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 MAMLD1Q13495 774 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 MED22Q15528 200 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 DENND5BQ6ZUT9 1274 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 ZNF534Q76KX8 674 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 NGEFQ8N5V2 710 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 PDILTQ8N807 584 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 L3MBTL4Q8NA19 623 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 OLIG1Q8TAK6 271 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 OR2A14Q96R47 310 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 NUDCD1Q96RS6 583 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 AASSQ9UDR5 926 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 LRWD1Q9UFC0 647 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 DBNLQ9UJU6 430 aaKnown RBP3.23□□□□□ -1.89
SMC4-227ENST00000497984 R3HDM2Q9Y2K5 976 aaKnown RBP3.23□□□□□ -1.89
SMC4-227ENST00000497984 LYVE1Q9Y5Y7 322 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 SESN1Q9Y6P5 492 aa3.23□□□□□ -1.89
SMC4-227ENST00000497984 ZNF646O15015 1829 aaPredicted RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 MEX3AA1L020 520 aaKnown RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 FRMD3A2A2Y4 597 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 DNM1LO00429 736 aa3.22□□□□□ -1.89
SMC4-227ENST00000497984 SRPRAP08240 638 aaKnown RBP3.22□□□□□ -1.89
SMC4-227ENST00000497984 HNF4AP41235 474 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms