RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 PTRH2Q9Y3E5 179 aaKnown RBP15.99■□□□□ 0.15
VIM-208ENST00000497849 CNOT3O75175 753 aaKnown RBP15.98■□□□□ 0.15
VIM-208ENST00000497849 CBSLP0DN79 551 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 FERP16591 822 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 POLR2CP19387 275 aaPredicted RBP15.98■□□□□ 0.15
VIM-208ENST00000497849 AGXTP21549 392 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 CBSP35520 551 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 PBX1P40424 430 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 XRCC4Q13426 336 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 B4GALNT4Q76KP1 1039 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 ZNF295-AS1Q8N0V1 137 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 NXPE1Q8N323 547 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 RASGEF1AQ8N9B8 481 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 DNAJB14Q8TBM8 379 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 GPR63Q9BZJ6 419 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 SLC7A5P2Q9GIP4 190 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 KIR3DX1Q9H7L2 352 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 ATP13A2Q9NQ11 1180 aa15.98■□□□□ 0.15
VIM-208ENST00000497849 E7EQ34 232 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 AURKAO14965 403 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 FTLP02792 175 aaPredicted RBP15.97■□□□□ 0.15
VIM-208ENST00000497849 ST6GAL1P15907 406 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 HTR1EP28566 365 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 FOLR3P41439 243 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 LMAN1P49257 510 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 SLC25A11Q02978 314 aaKnown RBP15.97■□□□□ 0.15
VIM-208ENST00000497849 CDC16Q13042 620 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 ZNF169Q14929 603 aaPredicted RBP15.97■□□□□ 0.15
VIM-208ENST00000497849 ZNF630Q2M218 657 aaPredicted RBP15.97■□□□□ 0.15
VIM-208ENST00000497849 CCDC122Q5T0U0 273 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 METRNLQ641Q3 311 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 BNC2Q6ZN30 1099 aaPredicted RBP15.97■□□□□ 0.15
VIM-208ENST00000497849 PARP9Q8IXQ6 854 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 CNTD1Q8N815 330 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 SPDYE1Q8NFV5 336 aaPredicted RBP15.97■□□□□ 0.15
VIM-208ENST00000497849 OR2Y1Q8NGV0 311 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 GDAP1Q8TB36 358 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 FAM71BQ8TC56 605 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 BRSK1Q8TDC3 778 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 ZFPM2Q8WW38 1151 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 TRIM5Q9C035 493 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 WWP1Q9H0M0 922 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 BPIFA1Q9NP55 256 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 HAUS2Q9NVX0 235 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 SERTAD3Q9UJW9 196 aa15.97■□□□□ 0.15
VIM-208ENST00000497849 NIPBLQ6KC79 2804 aaeCLIP15.96■□□□□ 0.15
VIM-208ENST00000497849 CCDC78A2IDD5 438 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 CBFA2T2O43439 604 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 DIAPH2O60879 1101 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 JRKO75564 520 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 UMODP07911 640 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 HBQ1P09105 142 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 COX6B1P14854 86 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 HLA-DPA1P20036 260 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 KRTAP10-9P60411 292 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 OTUD4Q01804 1114 aaKnown RBP15.96■□□□□ 0.15
VIM-208ENST00000497849 KRT81Q14533 505 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 B3GNTL1Q67FW5 361 aaPredicted RBP15.96■□□□□ 0.15
VIM-208ENST00000497849 TMEM220Q6QAJ8 160 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 SARM1Q6SZW1 724 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 OR4E2Q8NGC2 313 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 CPLX3Q8WVH0 158 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 C12orf66Q96MD2 445 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 TTC25Q96NG3 672 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 GBP5Q96PP8 586 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 CHST11Q9NPF2 352 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 MYO1AQ9UBC5 1043 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 SPO11Q9Y5K1 396 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 DNMT3AQ9Y6K1 912 aaPredicted RBP15.96■□□□□ 0.15
VIM-208ENST00000497849 SCINQ9Y6U3 715 aa15.96■□□□□ 0.15
VIM-208ENST00000497849 SPG11Q96JI7 2443 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 OR2AG2A6NM03 316 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 H3BMH7 237 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 GPR39O43194 453 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 CCDC172P0C7W6 258 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 PRDX3P30048 256 aaKnown RBP15.95■□□□□ 0.14
VIM-208ENST00000497849 ARSEP51690 589 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 ZNF75DP51815 510 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 TDGF1P3P51864 188 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 KCNK10P57789 538 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 ZBTB17Q13105 803 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 PRKAA1Q13131 559 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 AIMP2Q13155 320 aaKnown RBP15.95■□□□□ 0.14
VIM-208ENST00000497849 C1orf189Q5VU69 101 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 ZNF324BQ6AW86 544 aaPredicted RBP15.95■□□□□ 0.14
VIM-208ENST00000497849 MRPL14Q6P1L8 145 aaKnown RBP15.95■□□□□ 0.14
VIM-208ENST00000497849 CDHR3Q6ZTQ4 885 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 MRGPRGQ86SM5 289 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 COG1Q8WTW3 980 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 ANP32BQ92688 251 aaKnown RBP15.95■□□□□ 0.14
VIM-208ENST00000497849 PTERQ96BW5 349 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 CCDC120Q96HB5 630 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 CNDP1Q96KN2 507 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 AGAP3Q96P47 875 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 NRTNQ99748 197 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 C17orf62Q9BQA9 187 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 PITPNM3Q9BZ71 974 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 KLHL25Q9H0H3 589 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 OLAHQ9NV23 265 aa15.95■□□□□ 0.14
VIM-208ENST00000497849 CDYLQ9Y232 598 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms