RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 CLNS1AP54105 237 aaKnown RBP8.22□□□□□ -1.09
USP54-215ENST00000497106 TEAD4Q15561 434 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 KLHL35Q6PF15 583 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 RINLQ6ZS11 566 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 DCUN1D3Q8IWE4 304 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 PIANPQ8IYJ0 282 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 GIMAP7Q8NHV1 300 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 RFWD2Q8NHY2 731 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 HMGB4Q8WW32 186 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 SCAMP4Q969E2 229 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 SH3GL1Q99961 368 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 SLC2A4RGQ9NR83 387 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 SPATA7Q9P0W8 599 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 NDUFAF1Q9Y375 327 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 G3V2L1 256 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 NVLO15381 856 aaKnown RBP8.22□□□□□ -1.09
USP54-215ENST00000497106 GRID2O43424 1007 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 ESRRBO95718 433 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 POU3F3P20264 500 aaPredicted RBP8.22□□□□□ -1.09
USP54-215ENST00000497106 GABRB3P28472 473 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 FASTKQ14296 549 aaKnown RBP8.22□□□□□ -1.09
USP54-215ENST00000497106 PCBP2Q15366 365 aaKnown RBP eCLIP8.22□□□□□ -1.091e-12■■□□□ 13.5
USP54-215ENST00000497106 BCL7AQ4VC05 210 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 C12orf40Q86WS4 652 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 RIN3Q8TB24 985 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 SELENOMQ8WWX9 145 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 IER2Q9BTL4 223 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 S1PR5Q9H228 398 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 P2RY12Q9H244 342 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 IPPKQ9H8X2 491 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 AASDHPPTQ9NRN7 309 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 KLQ9UEF7 1012 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 BAIAP2L1Q9UHR4 511 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 PCDHGB4Q9UN71 923 aa8.22□□□□□ -1.09
USP54-215ENST00000497106 TDRKHQ9Y2W6 561 aaKnown RBP8.22□□□□□ -1.09
USP54-215ENST00000497106 A0A1W2PQU0 124 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 CFLARO15519 480 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 MBTPS2O43462 519 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 TBX10O75333 385 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 C1QAP02745 245 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 NQO1P15559 274 aaKnown RBP8.21□□□□□ -1.09
USP54-215ENST00000497106 P2RY2P41231 377 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 ATP4BP51164 291 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 RAP1GDS1P52306 607 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 CTSL3PQ5NE16 218 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 HENMT1Q5T8I9 393 aaKnown RBP8.21□□□□□ -1.09
USP54-215ENST00000497106 ARMCX6Q7L4S7 300 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 ADCK2Q7Z695 626 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 ISCA2Q86U28 154 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 DCP2Q8IU60 420 aaKnown RBP8.21□□□□□ -1.09
USP54-215ENST00000497106 ZNF781Q8N8C0 355 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 ASB12Q8WXK4 309 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 FGF14Q92915 247 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 POP5Q969H6 163 aaKnown RBP8.21□□□□□ -1.09
USP54-215ENST00000497106 FERD3LQ96RJ6 166 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 BTBD10Q9BSF8 475 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 SLC17A9Q9BYT1 436 aa8.21□□□□□ -1.09
USP54-215ENST00000497106 CDC7O00311 574 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 FSBPO95073 299 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 EBLN1P0CF75 366 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 MYCLP1P12525 358 aaPredicted RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 TARSP26639 723 aaKnown RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 C17orf64Q86WR6 236 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 HEATR4Q86WZ0 1026 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 ZNF655Q8N720 491 aaPredicted RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 PPP1R36Q96LQ0 422 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 WDR92Q96MX6 357 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 EFCAB11Q9BUY7 163 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 SLC12A9Q9BXP2 914 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 CD244Q9BZW8 370 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 DPEP2Q9H4A9 486 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 INTS7Q9NVH2 962 aaKnown RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 GPRC5BQ9NZH0 403 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 TRPS1Q9UHF7 1281 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 MTF2Q9Y483 593 aaPredicted RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 PSMD12O00232 456 aaPredicted RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 GUCY1B2O75343 617 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 TNFP01375 233 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 IDH3AP50213 366 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 SEMG2Q02383 582 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 PLCL1Q15111 1095 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 AP1ARQ63HQ0 302 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 SLC36A4Q6YBV0 504 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 LONP2Q86WA8 852 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 FNDC5Q8NAU1 212 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 KYQ8NBH2 561 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 CATSPER2Q96P56 530 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 TMEM237Q96Q45 408 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 TIMM29Q9BSF4 260 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 C1QTNF1Q9BXJ1 281 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 GSDMCQ9BYG8 508 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 NLNQ9BYT8 704 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 TMEM245Q9H330 911 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 NOL11Q9H8H0 719 aaKnown RBP8.21□□□□□ -1.1
USP54-215ENST00000497106 KCNK12Q9HB15 430 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 MMP17Q9ULZ9 603 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 IGLON5A6NGN9 336 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 ANP32DO95626 131 aa8.21□□□□□ -1.1
USP54-215ENST00000497106 C21orf59P57076 290 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms