RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	MYBL2	P10244	700 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	F3	P13726	295 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	IDS	P22304	550 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	ACP1	P24666	158 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	RPL10	P27635	214 aa	Known RBP	11.65	□□□□□ -0.54
APTX-233	ENST00000496030	PDHA2	P29803	388 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	PBLD	P30039	288 aa	Predicted RBP	11.65	□□□□□ -0.54
APTX-233	ENST00000496030	FMO4	P31512	558 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	CCR7	P32248	378 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	ACADVL	P49748	655 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	EIF3B	P55884	814 aa	Known RBP	11.65	□□□□□ -0.54
APTX-233	ENST00000496030	MAZ	P56270	477 aa	Known RBP	11.65	□□□□□ -0.54
APTX-233	ENST00000496030	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
APTX-233	ENST00000496030	MGAT5	Q09328	741 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	CLCA4	Q14CN2	919 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	KYNU	Q16719	465 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	FAM153C	Q494X1	144 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	C14orf28	Q4W4Y0	310 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	RNF187	Q5TA31	235 aa	Predicted RBP	11.65	□□□□□ -0.54
APTX-233	ENST00000496030	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.65	□□□□□ -0.54
APTX-233	ENST00000496030	GUSBP11	Q6P575	273 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	NAPRT	Q6XQN6	538 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	C3orf62	Q6ZUJ4	267 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	GPR155	Q7Z3F1	870 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	GALNT7	Q86SF2	657 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	LRRC6	Q86X45	466 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	SPNS2	Q8IVW8	549 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	PALM2	Q8IXS6	379 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	CFAP206	Q8IYR0	622 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	KRT222	Q8N1A0	295 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	OTUD6B	Q8N6M0	293 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	HM13	Q8TCT9	377 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	CALML6	Q8TD86	181 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	SLC37A2	Q8TED4	501 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	FMO2	Q99518	471 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	FAM167B	Q9BTA0	163 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	TXLNGY	Q9BZA5	131 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	NINJ2	Q9NZG7	142 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	RABGEF1	Q9UJ41	708 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	CDYL	Q9Y232	598 aa		11.65	□□□□□ -0.54
APTX-233	ENST00000496030	USP9X	Q93008	2570 aa	Predicted RBP	11.65	□□□□□ -0.55
APTX-233	ENST00000496030	PRAMEF33	A0A0G2JMD5	474 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	TEX51	A0A1B0GUA7	166 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	UBA6	A0AVT1	1052 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	FAM159B	A6NKW6	160 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	QSOX1	O00391	747 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	PPM1D	O15297	605 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	NIPSNAP2	O75323	286 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	GPC4	O75487	556 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	ESR1	P03372	595 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	GSTM1	P09488	218 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	OR56A5	P0C7T3	313 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	PKM	P14618	531 aa	Known RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	VCL	P18206	1134 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	ITGB6	P18564	788 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	XRCC1	P18887	633 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	AOAH	P28039	575 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	SLC19A1	P41440	591 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	PREP	P48147	710 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	UBE2I	P63279	158 aa	Known RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	GSTM4	Q03013	218 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	NR0B2	Q15466	257 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	PERM1	Q5SV97	790 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	ZNF449	Q6P9G9	518 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	LRRC69	Q6ZNQ3	347 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	CAPN12	Q6ZSI9	719 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	KIAA0408	Q6ZU52	694 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	ZNF438	Q7Z4V0	828 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	EIF1AD	Q8N9N8	165 aa	Known RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	NXPE2	Q96DL1	559 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	RMDN2	Q96LZ7	410 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	INSM2	Q96T92	566 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	FUT8	Q9BYC5	575 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	TSPYL1	Q9H0U9	437 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	OR52A5	Q9H2C5	316 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	OSGEPL1	Q9H4B0	414 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	COG4	Q9H9E3	785 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	LATS2	Q9NRM7	1088 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	NCKIPSD	Q9NZQ3	722 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	FAM8A1	Q9UBU6	413 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	MTRF1L	Q9UGC7	380 aa	Known RBP	11.64	□□□□□ -0.55
APTX-233	ENST00000496030	ACSL5	Q9ULC5	683 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	PSMD13	Q9UNM6	376 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	PCDHB1	Q9Y5F3	818 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	RNF215	Q9Y6U7	377 aa		11.64	□□□□□ -0.55
APTX-233	ENST00000496030	UBR5	O95071	2799 aa	Predicted RBP	11.63	□□□□□ -0.55
APTX-233	ENST00000496030	KIR2DS5	A0A0G2JLQ3	304 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030		A0A0G2JNG1	304 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	CPED1	A4D0V7	1026 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	OR52A4P	A6NMU1	304 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	KIR2DS3	K7RE56	304 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	NUDT21	O43809	227 aa	Known RBP	11.63	□□□□□ -0.55
APTX-233	ENST00000496030	FTH1	P02794	183 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	TNFRSF8	P28908	595 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	FASLG	P48023	281 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	RPIA	P49247	311 aa		11.63	□□□□□ -0.55
APTX-233	ENST00000496030	KCNC4	Q03721	635 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms