RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ACDQ96AP0 544 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 VPS50Q96JG6 964 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ADI1Q9BV57 179 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CHID1Q9BWS9 393 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ATP13A3Q9H7F0 1226 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 CLK4Q9HAZ1 481 aaKnown RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 PCDH10Q9P2E7 1040 aa11.01□□□□□ -0.65
CHMP3-209ENST00000494623 ZFC3H1O60293 1989 aaKnown RBP11.01□□□□□ -0.65
CHMP3-209ENST00000494623 LOC730098B7Z3J9 87 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 EI24O14681 340 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 RGS14O43566 566 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF821O75541 412 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 IGSF6O95976 241 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 HTR1EP28566 365 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 RFC2P35250 354 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 GGT5P36269 586 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 SPAM1P38567 509 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 STK19P49842 368 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 TLE2Q04725 743 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ARHGEF7Q14155 803 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 TTC33Q6PID6 262 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 PROSER1Q86XN7 944 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 TBC1D21Q8IYX1 336 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 FIBCD1Q8N539 461 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ASIC4Q96FT7 647 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 PPP3R2Q96LZ3 170 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 NSMCE2Q96MF7 247 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 CGREF1Q99674 301 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 SMG9Q9H0W8 520 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 RBM38Q9H0Z9 239 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 MUC13Q9H3R2 512 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ZFP14Q9HCL3 533 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 DDX18Q9NVP1 670 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 KIAA1522Q9P206 1035 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 DMTF1Q9Y222 760 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 ANAPC1Q9H1A4 1944 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 KANSL1LA0AUZ9 987 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 NPIPB15A6NHN6 443 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 TEX28O15482 410 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ULK1O75385 1050 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 NPPAP01160 153 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 UMPSP11172 480 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 FCGR1AP12314 374 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 RBBP5Q15291 538 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 TMTC4Q5T4D3 741 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 GRAMD4Q6IC98 578 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 SULT1C3Q6IMI6 304 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 CRTC1Q6UUV9 634 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 RFLNAQ6ZTI6 216 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 GAREM2Q75VX8 874 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 SPRED1Q7Z699 444 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ITIH5Q86UX2 942 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 DPP10Q8N608 796 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 MRPS31Q92665 395 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 RHBDF1Q96CC6 855 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 INTS6Q9UL03 887 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF490Q9ULM2 529 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 EIF3LQ9Y262 564 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 CCL27Q9Y4X3 112 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 TRIM17Q9Y577 477 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ANKRD28O15084 1053 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 SEC22BO75396 215 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 RASAL1O95294 804 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 OLFM2O95897 454 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 LDLRP01130 860 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF23P17027 643 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 NFKBIAP25963 317 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 VARSP26640 1264 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 SERPINA4P29622 427 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 PWP1Q13610 501 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 IMPG1Q17R60 797 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 PLEKHG6Q3KR16 790 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 TRIM60Q495X7 471 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 MPPE1Q53F39 396 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 LYPLAL1Q5VWZ2 237 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 MACC1Q6ZN28 852 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 REM2Q8IYK8 340 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 NXPE1Q8N323 547 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 ISG20Q96AZ6 181 aaKnown RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 ULK4Q96C45 1275 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 FBXL20Q96IG2 436 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 HERC2P3Q9BVR0 1158 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 SOX17Q9H6I2 414 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 ABCB8Q9NUT2 735 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 SPG21Q9NZD8 308 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 PTTG2Q9NZH5 202 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 HECAQ9UBI9 543 aaPredicted RBP11□□□□□ -0.65
CHMP3-209ENST00000494623 SLC8A2Q9UPR5 921 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 CEPT1Q9Y6K0 416 aa11□□□□□ -0.65
CHMP3-209ENST00000494623 TRBV5-4A0A0C4DH59 114 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 A0A1B0GVG6 124 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 DYTNA2CJ06 578 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 K7EPI3 171 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 ARNTLO00327 626 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 NRG2O14511 850 aaPredicted RBP10.99□□□□□ -0.65
CHMP3-209ENST00000494623 DFNA5O60443 496 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 SLC36A3Q495N2 470 aa10.99□□□□□ -0.65
CHMP3-209ENST00000494623 LRRC73Q5JTD7 316 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms