RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 FAM237AA0A1B0GTK4 181 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 A0A1B0GVM2 712 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CPED1A4D0V7 1026 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 E5RJQ4 531 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 F5H5T6 163 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 K7ERQ8 282 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CASC3O15234 703 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 MAGEC1O60732 1142 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CSO75390 466 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 SCAF4O95104 1147 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 LETM1O95202 739 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 PAK4O96013 591 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CSTBP04080 98 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CTSLP07711 333 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 GIMD1P0DJR0 217 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 PIM1P11309 404 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CKMT1AP12532 417 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 KRT5P13647 590 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 TGM2P21980 687 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CHRNA3P32297 505 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ALDH9A1P49189 494 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CARSP49589 748 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 RENBPP51606 427 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 PLK1P53350 603 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 YWHAZP63104 245 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 POU6F2P78424 691 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 SULT2A1Q06520 285 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF844Q08AG5 666 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF177Q13360 481 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 RAB32Q13637 225 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CDSNQ15517 529 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 PDCD2Q16342 344 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CDKN3Q16667 212 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 SETMARQ53H47 684 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 FAM46CQ5VWP2 391 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 KIAA1614Q5VZ46 1190 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 OR6B2Q6IFH4 312 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 FOXR2Q6PJQ5 311 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 Q6ZSR6 202 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 SPRED1Q7Z699 444 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 IQCHQ86VS3 1027 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 TRIM69Q86WT6 500 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ARHGEF19Q8IW93 802 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 HSCBQ8IWL3 235 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 SYTL1Q8IYJ3 562 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CACNA2D3Q8IZS8 1091 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 PDPRQ8NCN5 879 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 OR4C6Q8NH72 309 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CPT1CQ8TCG5 803 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF606Q8WXB4 792 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ALG14Q96F25 216 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 MARS2Q96GW9 593 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 HIC2Q96JB3 615 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 BTN2A3PQ96KV6 586 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF578Q96N58 590 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 RPRD1AQ96P16 312 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 TSG101Q99816 390 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 PRMT1Q99873 361 aaKnown RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CNPPD1Q9BV87 410 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CALN1Q9BXU9 219 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 CHST8Q9H2A9 424 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF703Q9H7S9 590 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-219ENST00000494323 PARPBPQ9NWS1 579 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 SLC12A6Q9UHW9 1150 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 SLC25A13Q9UJS0 675 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 VPS28Q9UK41 221 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 VANGL2Q9ULK5 521 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 GPR52Q9Y2T5 361 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 AHCTF1Q8WYP5 2266 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 LY6G6EA0A0G2JKS1 128 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 A0A1W2PNU3 283 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 FAM170AA1A519 330 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 GAGE12BA1L429 117 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 GAGE12HA6NDE8 117 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 NEMP2A6NFY4 417 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 KPNA3O00505 521 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SCAMP1O15126 338 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SLC16A3O15427 465 aaKnown RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SLC7A4O43246 635 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SMAD6O43541 496 aaKnown RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SNAP91O60641 907 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 PIAS2O75928 621 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 CNTN5O94779 1100 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 GRPP07492 148 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 FDXRP22570 491 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 RRM1P23921 792 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 USP8P40818 1118 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ACADSBP45954 432 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 RPL34P49207 117 aaKnown RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 DNA2P51530 1060 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 UCP3P55916 312 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 TMPRSS3P57727 454 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 OVGP1Q12889 678 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 NME3Q13232 169 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 EIF4EBP2Q13542 120 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-219ENST00000494323 SLC12A1Q13621 1099 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 BLMHQ13867 455 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF284Q2VY69 593 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 CCDC40Q4G0X9 1142 aa5.22□□□□□ -1.57
PTCD3-219ENST00000494323 CCDC38Q502W7 563 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms