RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CYP2S1Q96SQ9 504 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 ITPAQ9BY32 194 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 AMBNQ9NP70 447 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 STMN3Q9NZ72 180 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 CDH9Q9ULB4 789 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 RNF6Q9Y252 685 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 GMPPBQ9Y5P6 360 aa11.52□□□□□ -0.57
HDAC4-210ENST00000493582 FAM234BA2RU67 622 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 C12orf71A8MTZ7 269 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 H3BQ06 376 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-210ENST00000493582 CTDSP2O14595 271 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 TMCC2O75069 709 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 CPNE3O75131 537 aaKnown RBP11.51□□□□□ -0.57
HDAC4-210ENST00000493582 GRIK1P39086 918 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 SLC15A1P46059 708 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 OR3A3P47888 321 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 SCNN1GP51170 649 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ARPP19P56211 112 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 NFKB2Q00653 900 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 MVKQ03426 396 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 C19orf57Q0VDD7 668 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 GPR50Q13585 617 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ZNF517Q6ZMY9 492 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-210ENST00000493582 LRRC8DQ7L1W4 858 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 CILP2Q8IUL8 1156 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 CCDC28AQ8IWP9 274 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 GRPEL2Q8TAA5 225 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ASB2Q96Q27 587 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 VPS35Q96QK1 796 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 SLA2Q9H6Q3 261 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ZFP14Q9HCL3 533 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 TBC1D24Q9ULP9 559 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 KCNH4Q9UQ05 1017 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ASB14A6NK59 587 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 M0R082 166 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ENPP3O14638 875 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 KRT6AP02538 564 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 KRT6BP04259 564 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 PRR35P0CG20 571 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 CYP2A7P20853 494 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 KRT20P35900 424 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 RPL34P49207 117 aaKnown RBP11.51□□□□□ -0.57
HDAC4-210ENST00000493582 NRG1Q02297 640 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-210ENST00000493582 IL18R1Q13478 541 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 IRF3Q14653 427 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 DUSP7Q16829 419 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 TYSND1Q2T9J0 566 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 C6orf136Q5SQH8 315 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ZFAND4Q86XD8 727 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 PIK3R3Q92569 461 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 NCLNQ969V3 563 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 RNF170Q96K19 258 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 NECTIN4Q96NY8 510 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 TMEM209Q96SK2 561 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 GDF15Q99988 308 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 OR51E2Q9H255 320 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 GORASP2Q9H8Y8 452 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 GLOD4Q9HC38 313 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 RGS18Q9NS28 235 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 PRMT7Q9NVM4 692 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-210ENST00000493582 DDIT4Q9NX09 232 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ZNF225Q9UK10 706 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 RABL2BQ9UNT1 228 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 SNX8Q9Y5X2 465 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 LOC110117498-PIK3R3F6TDL0 507 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 PSMD3O43242 534 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ANXA9O76027 345 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 IFI30P13284 250 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 ARSDP51689 593 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 LCP2Q13094 533 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 STARD3Q14849 445 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 KIAA0319Q5VV43 1072 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 NOXA1Q86UR1 476 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 SETD9Q8NE22 299 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 PDLIM5Q96HC4 596 aaKnown RBP11.51□□□□□ -0.57
HDAC4-210ENST00000493582 MRGPRX2Q96LB1 330 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 KCNS3Q9BQ31 491 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 BRINP2Q9C0B6 783 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 TM9SF3Q9HD45 589 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 PGAP2Q9UHJ9 254 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 DNMT3LQ9UJW3 386 aa11.51□□□□□ -0.57
HDAC4-210ENST00000493582 EVPLQ92817 2033 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 A0A1W2PQ72 361 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 FAM25AB3EWG3 89 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 FAM25CB3EWG5 89 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 FAM25GB3EWG6 89 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 SUPT3HB4E1H0 165 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 hCG_2039718K7EN88 272 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 PDHXO00330 501 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 CAPN5O15484 640 aaPredicted RBP11.5□□□□□ -0.57
HDAC4-210ENST00000493582 PAPSS2O95340 614 aaPredicted RBP11.5□□□□□ -0.57
HDAC4-210ENST00000493582 STAU1O95793 577 aaKnown RBP11.5□□□□□ -0.57
HDAC4-210ENST00000493582 S1PR4O95977 384 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 ADRA1AP35348 466 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 UGT2B10P36537 528 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 CTSKP43235 329 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 AGTR2P50052 363 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 HUNKP57058 714 aa11.5□□□□□ -0.57
HDAC4-210ENST00000493582 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms