RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 SPTBP11277 2137 aa13.31□□□□□ -0.28
SAMM50-204ENST00000493161 CREBBPQ92793 2442 aa13.31□□□□□ -0.28
SAMM50-204ENST00000493161 DOPEY1Q5JWR5 2465 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 BTN3A3O00478 584 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 PVRP15151 417 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 OTX2P32243 289 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 PREPP48147 710 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 ADCY2Q08462 1091 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 GSE1Q14687 1217 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 NCF4Q15080 339 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 SLC1A5Q15758 541 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 KYNUQ16719 465 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 MFSD7Q6UXD7 560 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 SLC35G2Q8TBE7 412 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 ZNF398Q8TD17 642 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 ZFPM2Q8WW38 1151 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 INPP5DQ92835 1189 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 GBP4Q96PP9 640 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 NTNG1Q9Y2I2 539 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 LUC7L2Q9Y383 392 aaKnown RBP13.3□□□□□ -0.28
SAMM50-204ENST00000493161 HYOU1Q9Y4L1 999 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 ARL5AQ9Y689 179 aa13.3□□□□□ -0.28
SAMM50-204ENST00000493161 GSAPA4D1B5 854 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 BTN3A1O00481 513 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ZNF749O43361 778 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 HCRTR1O43613 425 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 KLF7O75840 302 aaPredicted RBP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 PRAMEF1O95521 474 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 EPOP01588 193 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 SLC35G4P0C7Q5 338 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 TNNT1P13805 278 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ZFXP17010 805 aaPredicted RBP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 CYP2A7P20853 494 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 PRDX3P30048 256 aaKnown RBP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ITGA9Q13797 1035 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 LONRF2Q1L5Z9 754 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ASTE1Q2TB18 679 aaPredicted RBP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 CRB2Q5IJ48 1285 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ZDHHC20Q5W0Z9 365 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ZNF385CQ66K41 422 aaPredicted RBP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 SPOCD1Q6ZMY3 1216 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 VSIG1Q86XK7 387 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 HPS6Q86YV9 775 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 CFAP206Q8IYR0 622 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ZNF567Q8N184 647 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 CARFQ8N187 725 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 IPMKQ8NFU5 416 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 SGSM3Q96HU1 749 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 SRMSQ9H3Y6 488 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 FANCEQ9HB96 536 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ZBTB20Q9HC78 741 aaPredicted RBP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 C1GALT1Q9NS00 363 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 SMOXQ9NWM0 555 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ACSL5Q9ULC5 683 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 G3BP2Q9UN86 482 aaKnown RBP13.29□□□□□ -0.28
SAMM50-204ENST00000493161 SLC5A6Q9Y289 635 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 PKP3Q9Y446 797 aa13.29□□□□□ -0.28
SAMM50-204ENST00000493161 ANKUB1A6NFN9 424 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 MBD3O95983 291 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 AGTP01019 485 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 CTSBP07858 339 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 TMEM253P0C7T8 217 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 CBSLP0DN79 551 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 CBSP35520 551 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 RRADP55042 308 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 UBASH3AP57075 661 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 PRKAA1Q13131 559 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 OLIG2Q13516 323 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 KRT33BQ14525 404 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 BCL7AQ4VC05 210 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 VWA5B1Q5TIE3 1220 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 C1QL3Q5VWW1 255 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 CDHR3Q6ZTQ4 885 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 MRGPREQ86SM8 312 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 ZC3H18Q86VM9 953 aaKnown RBP13.28□□□□□ -0.28
SAMM50-204ENST00000493161 IQCKQ8N0W5 287 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 PHC3Q8NDX5 983 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 ACVR1CQ8NER5 493 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 TFB1MQ8WVM0 346 aaKnown RBP13.28□□□□□ -0.28
SAMM50-204ENST00000493161 LCN9Q8WX39 176 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 TRAPPC9Q96Q05 1148 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 FCRL5Q96RD9 977 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 FERD3LQ96RJ6 166 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 GORASP1Q9BQQ3 440 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 PITPNM3Q9BZ71 974 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 XKR8Q9H6D3 395 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 C10orf88Q9H8K7 445 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 HACD3Q9P035 362 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 C5AR2Q9P296 337 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 FKBPLQ9UIM3 349 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 B3GNT3Q9Y2A9 372 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 COLEC10Q9Y6Z7 277 aa13.28□□□□□ -0.28
SAMM50-204ENST00000493161 STX7O15400 261 aaKnown RBP13.27□□□□□ -0.29
SAMM50-204ENST00000493161 LDB2O43679 373 aa13.27□□□□□ -0.29
SAMM50-204ENST00000493161 CNOT3O75175 753 aaKnown RBP13.27□□□□□ -0.29
SAMM50-204ENST00000493161 VARSP26640 1264 aaKnown RBP13.27□□□□□ -0.29
SAMM50-204ENST00000493161 CDKN2BP42772 138 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms