RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 LPGAT1Q92604 370 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 MAELQ96JY0 434 aaKnown RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 ERVK-6Q9BXR3 956 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 NLE1Q9NVX2 485 aaPredicted RBP6.92□□□□□ -1.3
HERC4-211ENST00000492996 DKK3Q9UBP4 350 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 SCML1Q9UN30 329 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 DOLKQ9UPQ8 538 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 MED16Q9Y2X0 877 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 DNAJC15Q9Y5T4 150 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 COMMD10Q9Y6G5 202 aa6.92□□□□□ -1.3
HERC4-211ENST00000492996 ANKRD36A6QL64 1941 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 E7ENX8 843 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 PIP5K1BO14986 540 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 WISP3O95389 354 aaPredicted RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 CD160O95971 181 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ME2P23368 584 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CSKP41240 450 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 TRPC1P48995 793 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 HK2P52789 917 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 PSME3P61289 254 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CYP4F8P98187 520 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 TAF1AQ15573 450 aaPredicted RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 ZNF423Q2M1K9 1284 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 SETMARQ53H47 684 aaPredicted RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 PIGGQ5H8A4 983 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 AFTPHQ6ULP2 937 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CYP2R1Q6VVX0 501 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 SETD3Q86TU7 594 aaPredicted RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 KBTBD6Q86V97 674 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CPNE9Q8IYJ1 553 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 PGAM4Q8N0Y7 254 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 FBXO39Q8N4B4 442 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 JADE3Q92613 823 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 PLD4Q96BZ4 506 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 TUBGCP3Q96CW5 907 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 C19orf60Q96EN9 201 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 HBEGFQ99075 208 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 GPR63Q9BZJ6 419 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 TRIM8Q9BZR9 551 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 AKTIPQ9H8T0 292 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ERVMER34-1Q9H9K5 563 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 COPS7BQ9H9Q2 264 aaPredicted RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 AASDHPPTQ9NRN7 309 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ACSL6Q9UKU0 697 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CPQQ9Y646 472 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 MYOFQ9NZM1 2061 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ADAMTS20P59510 1910 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CAPN8A6NHC0 703 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 E5RI56 91 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 SLC9A3R1O14745 358 aaPredicted RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 SMAD6O43541 496 aaKnown RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 DNAJA2O60884 412 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CKMP06732 381 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ALDOCP09972 364 aaKnown RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 OGNP20774 298 aaKnown RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 RAD51Q06609 339 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ILKQ13418 452 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 GRB7Q14451 532 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 LYSMD3Q7Z3D4 306 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 APCDD1Q8J025 514 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 PELI3Q8N2H9 469 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 DDI1Q8WTU0 396 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 EEF1AKMT1Q8WVE0 214 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 DNASE2BQ8WZ79 361 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 HSPBAP1Q96EW2 488 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 FAR2Q96K12 515 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 GCNAQ96QF7 691 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ATOH8Q96SQ7 321 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 C19orf43Q9BQ61 176 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 KLF16Q9BXK1 252 aaPredicted RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 SLC7A5P2Q9GIP4 190 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 MEAF6Q9HAF1 191 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ATAD3AQ9NVI7 634 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 VPS51Q9UID3 782 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 PRPF19Q9UMS4 504 aaKnown RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 RBMX2Q9Y388 322 aaKnown RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 H3BNX3 289 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 NR5A2O00482 541 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 FBP2O00757 339 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 MRASO14807 208 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 AZIN1O14977 448 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 PKMP14618 531 aaKnown RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 STX1BP61266 288 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 DMC1Q14565 340 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 RPS6KA2Q15349 733 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 REP15Q6BDI9 236 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 UGT3A1Q6NUS8 523 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 FAM151BQ6UXP7 276 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 SLC36A4Q6YBV0 504 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 KANSL1Q7Z3B3 1105 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CLYBLQ8N0X4 340 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 CLDN19Q8N6F1 224 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 GPR150Q8NGU9 434 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 STAG3L4Q8TBR4 150 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 TWIST2Q8WVJ9 160 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 RPL10LQ96L21 214 aaKnown RBP6.91□□□□□ -1.3
HERC4-211ENST00000492996 PHF12Q96QT6 1004 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ACOX2Q99424 681 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 FEM1AQ9BSK4 669 aa6.91□□□□□ -1.3
HERC4-211ENST00000492996 ADGRE3Q9BY15 652 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms