RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PRR30Q53SZ7 412 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 CAPRIN2Q6IMN6 1127 aaKnown RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 ATG14Q6ZNE5 492 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 BZW1Q7L1Q6 419 aaKnown RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 SERPINA9Q86WD7 417 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 CDKL3Q8IVW4 592 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 NXPE1Q8N323 547 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 C2orf73Q8N5S3 287 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 ESX1Q8N693 406 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 AMER2Q8N7J2 671 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 OR52K1Q8NGK4 314 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 C9orf43Q8TAL5 461 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 LKAAEAR1Q8TD35 194 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 BRSK1Q8TDC3 778 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 KIAA1143Q96AT1 154 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 ZNF501Q96CX3 271 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-211ENST00000491581 SLC41A2Q96JW4 573 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 HS3ST6Q96QI5 342 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 PANX2Q96RD6 677 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 FERD3LQ96RJ6 166 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 VAT1Q99536 393 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 OR52A5Q9H2C5 316 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 COG4Q9H9E3 785 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 FAM60AQ9NP50 221 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 LHX9Q9NQ69 397 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 FGF21Q9NSA1 209 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 SMOXQ9NWM0 555 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 HACD3Q9P035 362 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 IMPACTQ9P2X3 320 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 KLHL20Q9Y2M5 609 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 MYO18BQ8IUG5 2567 aa8.67□□□□□ -1.02
HDAC3-211ENST00000491581 UBA6A0AVT1 1052 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-211ENST00000491581 CCDC162PA2VCL2 907 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 GSAPA4D1B5 854 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ARGFXA6NJG6 315 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 C2orf81A6NN90 581 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 AGAP14A8MT82 685 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 IQCF5A8MTL0 148 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ANXA9O76027 345 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 SLC35G4P0C7Q5 338 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ATP1B2P14415 290 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-211ENST00000491581 VCLP18206 1134 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 UQCRFS1P47985 274 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 PRLHRP49683 370 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 KLF1Q13351 362 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-211ENST00000491581 RAPSNQ13702 412 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 SLC9A5Q14940 896 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ZIC1Q15915 447 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 LONRF2Q1L5Z9 754 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 BCL7AQ4VC05 210 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ZNF789Q5FWF6 425 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ITPRIPL1Q6GPH6 555 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 TAS2R42Q7RTR8 314 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 PPP1R3BQ86XI6 285 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 VRK3Q8IV63 474 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 DTWD1Q8N5C7 304 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 AVL9Q8NBF6 648 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 OR52E1Q8NGJ3 308 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 OR5AR1Q8NGP9 310 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 OR1L3Q8NH93 324 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 C1orf54Q8WWF1 131 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ZDHHC12Q96GR4 267 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ZNF514Q96K75 400 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-211ENST00000491581 TWSG1Q9GZX9 223 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 CHST8Q9H2A9 424 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 EPB41L1Q9H4G0 881 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 KIR3DX1Q9H7L2 352 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 SOHLH2Q9NX45 425 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 SPHK1Q9NYA1 384 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 EPHA6Q9UF33 1036 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
HDAC3-211ENST00000491581 TLK1Q9UKI8 766 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 RARRES3Q9UL19 164 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 ICKQ9UPZ9 632 aa8.66□□□□□ -1.02
HDAC3-211ENST00000491581 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC3-211ENST00000491581 MED13Q9UHV7 2174 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 C5orf60A6NFR6 353 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 ARHGAP6O43182 974 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 NRP2O60462 931 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 CREG1O75629 220 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 SCRG1O75711 98 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 ACRV1P26436 265 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 PEBP1P30086 187 aaKnown RBP8.65□□□□□ -1.02
HDAC3-211ENST00000491581 PTPN7P35236 360 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 PTGIRP43119 386 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 TNNT3P45378 269 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-211ENST00000491581 CSRP3P50461 194 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 COPS2P61201 443 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 CRADDP78560 199 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 PRPSAP1Q14558 356 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 IL11RAQ14626 422 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 NADK2Q4G0N4 442 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 C1orf189Q5VU69 101 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 ARHGEF18Q6ZSZ5 1173 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 PEX26Q7Z412 305 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 SNX20Q7Z614 316 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 TAX1BP1Q86VP1 789 aa8.65□□□□□ -1.02
HDAC3-211ENST00000491581 TMTC1Q8IUR5 882 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms