RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FBXL4Q9UKA2 621 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 AP4E1Q9UPM8 1137 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 CHKBQ9Y259 395 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 RPH3AQ9Y2J0 694 aaPredicted RBP8.9□□□□□ -0.98
SSBP1-212ENST00000489378 FHOD1Q9Y613 1164 aa8.9□□□□□ -0.98
SSBP1-212ENST00000489378 INTS1Q8N201 2190 aaKnown RBP8.9□□□□□ -0.99
SSBP1-212ENST00000489378 OR6C74A6NCV1 312 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 KIAA1324LA8MWY0 1029 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 AGPSO00116 658 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 FANCGO15287 622 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 DAPK3O43293 454 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 ZNF749O43361 778 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 WISP2O76076 250 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 PRLP01236 227 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 AGXTP21549 392 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 DNAJA1P31689 397 aaKnown RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 PPP1R2P41236 205 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 SMSP52788 366 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 EPHB1P54762 984 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 RPL7AP62424 266 aaKnown RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 PPP2R2AP63151 447 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 FMO1Q01740 532 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 ADCY2Q08462 1091 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 SLC9A5Q14940 896 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 RPE65Q16518 533 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 KHDC1Q4VXA5 237 aaKnown RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 RALGPS1Q5JS13 557 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 ZNF569Q5MCW4 686 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 C1orf189Q5VU69 101 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 ALS2CLQ60I27 953 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 FAAH2Q6GMR7 532 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 LINC00696Q6ZRV3 163 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 NCCRP1Q6ZVX7 275 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 Q71RC1 249 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 TAOK1Q7L7X3 1001 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 C11orf96Q7Z7L8 435 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 RAVER1Q8IY67 606 aaKnown RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 ADAMTS18Q8TE60 1221 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 PTERQ96BW5 349 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 TREX2Q9BQ50 279 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-212ENST00000489378 SLC7A5P2Q9GIP4 190 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 VPS16Q9H269 839 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 EPS8L2Q9H6S3 715 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 GDPD2Q9HCC8 539 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 CDYLQ9Y232 598 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 HRH3Q9Y5N1 445 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 VPS13CQ709C8 3753 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 ATRQ13535 2644 aa8.89□□□□□ -0.99
SSBP1-212ENST00000489378 C1orf232A0A0U1RR37 186 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 TCRBV5S1A1TA0A578 114 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CCDC66A2RUB6 948 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 SIGLEC16A6NMB1 481 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 GPR89AB7ZAQ6 455 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 MAFKO60675 156 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 KLHL18O94889 574 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 GPR89BP0CG08 455 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 HALP42357 657 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 MMP13P45452 471 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 PREPP48147 710 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 LMAN1P49257 510 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 OGDHQ02218 1023 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 GALNT3Q14435 633 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 C3AR1Q16581 482 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 OOSP2Q86WS3 158 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 PRIMA1Q86XR5 153 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CHDHQ8NE62 594 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 EID2BQ96D98 161 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 LYSMD1Q96S90 227 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 PEBP4Q96S96 227 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 FOXC2Q99958 501 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CNPY3Q9BT09 278 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 NDC1Q9BTX1 674 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 SPATA16Q9BXB7 569 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 NT5MQ9NPB1 228 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 PKD2L2Q9NZM6 624 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 TNFRSF10DQ9UBN6 386 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 SEC14L3Q9UDX4 400 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 GPN3Q9UHW5 284 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 TINAGQ9UJW2 476 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 SERTAD3Q9UJW9 196 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 PSMD13Q9UNM6 376 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 E7EQ34 232 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 VEGFDO43915 354 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 ESRRAP11474 423 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CDH3P22223 829 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 GSCP56915 257 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CDR2Q01850 454 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 DSC2Q02487 901 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 DPYSQ14117 519 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CAMK4Q16566 473 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 SKOR2Q2VWA4 1001 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 PPP6R3Q5H9R7 873 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 ARMC6Q6NXE6 501 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 ISLR2Q6UXK2 745 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 FAM83HQ6ZRV2 1179 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-212ENST00000489378 CARFQ8N187 725 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 BBS5Q8N3I7 341 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 C3orf20Q8ND61 904 aa8.88□□□□□ -0.99
SSBP1-212ENST00000489378 GPR26Q8NDV2 337 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms