RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 NR2C2P49116 596 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 RHOAP61586 193 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 SNRPD1P62314 119 aaKnown RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 PLP2Q04941 152 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 CCDC15Q0P6D6 951 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 FOXL1Q12952 345 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 TARDBPQ13148 414 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 DUSP8Q13202 625 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 PAFAH1B3Q15102 231 aaKnown RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 RPS6KA1Q15418 735 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 KHDC1Q4VXA5 237 aaKnown RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 INO80DQ53TQ3 878 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF569Q5MCW4 686 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 AFMIDQ63HM1 303 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 KAZNQ674X7 775 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 PMS2CLQ68D20 193 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 NCBP2-AS2Q69YL0 99 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 C22orf39Q6P5X5 142 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 MFSD7Q6UXD7 560 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 CCNI2Q6ZMN8 369 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 SPOCD1Q6ZMY3 1216 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 NT5DC3Q86UY8 548 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 RYBPQ8N488 228 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 HDDC3Q8N4P3 179 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 NPWQ8N729 165 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 LRRC57Q8N9N7 239 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 LSM14AQ8ND56 463 aaKnown RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 GANCQ8TET4 914 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ST8SIA2Q92186 375 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 PIGKQ92643 395 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ISG20Q96AZ6 181 aaKnown RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ERLEC1Q96DZ1 483 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF599Q96NL3 588 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 CINPQ9BW66 212 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 TPSD1Q9BZJ3 242 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 DYRK4Q9NR20 520 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ETNK2Q9NVF9 386 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 CACNA1EQ15878 2313 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ABCA7Q8IZY2 2146 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 PLXNB3Q9ULL4 1909 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 A0A0U1RQJ8 604 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CAPN8A6NHC0 703 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CAPN14A8MX76 684 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 K7ERQ8 282 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CTIFO43310 598 aaKnown RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 SMAD6O43541 496 aaKnown RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 FOXS1O43638 330 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 MFSD11O43934 449 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CST8O60676 142 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 TMCC1O94876 653 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 TJP3O95049 919 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 GSRP00390 522 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 IL1BP01584 269 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 AMY1AP04745 511 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 ALOX15P16050 662 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 GABRG2P18507 467 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 TGM2P21980 687 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 HSPA9P38646 679 aaKnown RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CDKN2BP42772 138 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 PSMD8P48556 350 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 MARCKSL1P49006 195 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 DHPSP49366 369 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 RENBPP51606 427 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 ATXN3P54252 364 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CTXN1P60606 82 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 RPS14P62263 151 aaKnown RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 DYNLT1P63172 113 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 FAM193AP78312 1265 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 DSC2Q02487 901 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 GALNT2Q10471 571 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF235Q14590 738 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 PDK1Q15118 436 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CST6Q15828 149 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CARD16Q5EG05 197 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 C9orf64Q5T6V5 341 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 SEL1L2Q5TEA6 688 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 SLC9A4Q6AI14 798 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 SLC36A4Q6YBV0 504 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 LEKR1Q6ZMV7 388 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 MMAAQ8IVH4 418 aaKnown RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 ARHGAP12Q8IWW6 846 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 STK40Q8N2I9 435 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF843Q8N446 348 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 PQLC3Q8N755 202 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 PAF1Q8N7H5 531 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 CCNYQ8ND76 341 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 MNS1Q8NEH6 495 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZFP28Q8NHY6 868 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 ADAMTS14Q8WXS8 1223 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 KRT35Q92764 455 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 P3H4Q92791 437 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 PPP1R16AQ96I34 528 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 MRGPRX1Q96LB2 322 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 GDAP1L1Q96MZ0 367 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 NAPGQ99747 312 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 OMDQ99983 421 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 VRK1Q99986 396 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 FERMT1Q9BQL6 677 aa8.06□□□□□ -1.12
TRAPPC12-221ENST00000489032 HEPHQ9BQS7 1158 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms