RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 IPO8O15397 1037 aaKnown RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 PRAMEF11O60813 436 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 CSPG5O95196 566 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 ACP2P11117 423 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 CBLP22681 906 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 MC5RP33032 325 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 AHRP35869 848 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 FMO5P49326 533 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 RPL24P83731 157 aaKnown RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 GAGE2BQ13066 116 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 SNTB1Q13884 538 aaKnown RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 GAGE2EQ4V326 116 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 CBWD6Q4V339 395 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 CBWD3Q5JTY5 395 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 C9orf152Q5JTZ5 239 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 GCNT6Q5T4J0 391 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 RNASEH2BQ5TBB1 312 aaKnown RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 NDUFAF5Q5TEU4 345 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 GAGE2AQ6NT46 116 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 ZNF852Q6ZMS4 543 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 PLEKHM3Q6ZWE6 761 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 ZNF771Q7L3S4 317 aaPredicted RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 KRT74Q7RTS7 529 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 TMEM173Q86WV6 379 aaPredicted RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 FAM114A1Q8IWE2 563 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 MAB21L3Q8N8X9 362 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 OR5M8Q8NGP6 311 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 OR13A1Q8NGR1 328 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 DAZLQ92904 295 aaKnown RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 ZNF830Q96NB3 372 aaPredicted RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 NEK1Q96PY6 1258 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 SLX1AQ9BQ83 275 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 GPR88Q9GZN0 384 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 ANKRD2Q9GZV1 360 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 PELI2Q9HAT8 420 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 HHATLQ9HCP6 504 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 CCDC177Q9NQR7 707 aaPredicted RBP3.08□□□□□ -1.92
CD46-215ENST00000488596 DONSONQ9NYP3 566 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 C5AR2Q9P296 337 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 GAGE2DQ9UEU5 116 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 ANAPC2Q9UJX6 822 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.08□□□□□ -1.92
CD46-215ENST00000488596 ZNF541Q9H0D2 1346 aa3.08□□□□□ -1.92
CD46-215ENST00000488596 A0A0G2JNG1 304 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 C15orf62A8K5M9 175 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 TCERG1O14776 1098 aaKnown RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 XPNPEP2O43895 674 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 GPR137BO60478 399 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 TBX10O75333 385 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 TOMM70O94826 608 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 TRUB2O95900 331 aaKnown RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 PFKFB1P16118 471 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 CKMT2P17540 419 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 NR1D1P20393 614 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 DGKAP23743 735 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 CPT2P23786 658 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 MMP15P51511 669 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 CCR3P51677 355 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 TPD52P55327 224 aaPredicted RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 CDK3Q00526 305 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 MBTD1Q05BQ5 628 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 ALCAMQ13740 583 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 KIR2DS5Q14953 304 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 KYNUQ16719 465 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 DUOXA1Q1HG43 343 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 SIRPB2Q5JXA9 342 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 KLC3Q6P597 504 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 C9orf139Q6ZV77 190 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 EXOC3L1Q86VI1 746 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 NAGSQ8N159 534 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 CRYBG2Q8N1P7 616 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 CIARTQ8N365 385 aaPredicted RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 AFAP1Q8N556 730 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 TC2NQ8N9U0 490 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 TDRD5Q8NAT2 981 aaKnown RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 RDM1Q8NG50 284 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 OR6J1Q8NGC5 347 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 OR10S1Q8NGN2 331 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 SPACA9Q96E40 222 aaPredicted RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 RADILQ96JH8 1075 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 CNDP2Q96KP4 475 aaKnown RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 ABHD6Q9BV23 337 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 OR10A4Q9H209 315 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 DPAGT1Q9H3H5 408 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 GIMAP2Q9UG22 337 aa3.07□□□□□ -1.92
CD46-215ENST00000488596 FAF1Q9UNN5 650 aaPredicted RBP3.07□□□□□ -1.92
CD46-215ENST00000488596 TRBC2A0A5B9 178 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 FEZF1A0PJY2 475 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 ELOVL7A1L3X0 281 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 ANKUB1A6NFN9 424 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 TSPY2A6NKD2 308 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 DVL1O14640 695 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 MEIS2O14770 477 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 CAPN9O14815 690 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 BUB3O43684 328 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 BUD23O43709 281 aaKnown RBP3.06□□□□□ -1.92
CD46-215ENST00000488596 SYNGR3O43761 229 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 CTSVO60911 334 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 SLCO2B1O94956 709 aa3.06□□□□□ -1.92
CD46-215ENST00000488596 BAG4O95429 457 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms