RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 GALNT7Q86SF2 657 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 SLCO6A1Q86UG4 719 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 C17orf82Q86X59 251 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 RELL1Q8IUW5 271 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 RBM12BQ8IXT5 1001 aaKnown RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 PPM1NQ8N819 430 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 LKAAEAR1Q8TD35 194 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 ADAMTS14Q8WXS8 1223 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 ATXN7L3BQ96GX2 97 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 FERD3LQ96RJ6 166 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 INSM2Q96T92 566 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 AARSD1Q9BTE6 412 aaKnown RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 CDC42EP4Q9H3Q1 356 aaKnown RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 POT1Q9NUX5 634 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 TOR4AQ9NXH8 423 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 KCNK4Q9NYG8 393 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 TAS2R13Q9NYV9 303 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 CORO1CQ9ULV4 474 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 CFAP20Q9Y6A4 193 aaKnown RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 V9GYY5 206 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-219ENST00000488186 ASXL3Q9C0F0 2248 aa15.39■□□□□ 0.05
C9orf3-219ENST00000488186 SLC5A10A0PJK1 596 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 FAM221BA6H8Z2 402 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 PPM1DO15297 605 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 MTHFD1P11586 935 aaKnown RBP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 SAT1P21673 171 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 NDUFS1P28331 727 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 PDHA2P29803 388 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 SKIV2L2P42285 1042 aaKnown RBP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 ABCG1P45844 678 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 GPR3P46089 330 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 FASLGP48023 281 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 PMS2P54278 862 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 SLC12A2P55011 1212 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 ABRQ12979 859 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 AMZ1Q400G9 498 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 PERM1Q5SV97 790 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 CAPRIN2Q6IMN6 1127 aaKnown RBP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 ZNF549Q6P9A3 640 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 CACTIN-AS1Q8N1I8 211 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 ZBTB2Q8N680 514 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 WDR48Q8TAF3 677 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 TFGQ92734 400 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 KCNJ9Q92806 393 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 INPP5DQ92835 1189 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 ELMO2Q96JJ3 720 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 FOPNLQ96NB1 174 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 CYTH2Q99418 400 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 NDNQ99608 321 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 CPNE1Q99829 537 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 OR52A5Q9H2C5 316 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 ANKZF1Q9H8Y5 726 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 ZNF624Q9P2J8 865 aaPredicted RBP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 TRMT6Q9UJA5 497 aaKnown RBP15.38■□□□□ 0.05
C9orf3-219ENST00000488186 WASF3Q9UPY6 502 aa15.38■□□□□ 0.05
C9orf3-219ENST00000488186 FAM159BA6NKW6 160 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 PIAS1O75925 651 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 AMD1P17707 334 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 GABRB3P28472 473 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 TNFRSF8P28908 595 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 MAPK9P45984 424 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 OR1D5P58170 312 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 UBE2IP63279 158 aaKnown RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 NAB1Q13506 487 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 PLCL1Q15111 1095 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 UAP1Q16222 522 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 HECTD2Q5U5R9 776 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 FAM45BPQ6NSW5 357 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 TTC23LQ6PF05 361 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 DHRS13Q6UX07 377 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 CCNI2Q6ZMN8 369 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 TMEM26Q6ZUK4 368 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 TRMT10CQ7L0Y3 403 aaKnown RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 RAB44Q7Z6P3 723 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 PDZD3Q86UT5 571 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 ZNF761Q86XN6 746 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 GSPT2Q8IYD1 628 aaKnown RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 SIDT2Q8NBJ9 832 aaKnown RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 OR10G6Q8NH81 332 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 FAM45AQ8TCE6 357 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 MRRFQ96E11 262 aaKnown RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 RMDN2Q96LZ7 410 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 GFM1Q96RP9 751 aaKnown RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 GPR21Q99679 349 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 SMYD2Q9NRG4 433 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 LATS2Q9NRM7 1088 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 TSR3Q9UJK0 312 aaKnown RBP15.37■□□□□ 0.05
C9orf3-219ENST00000488186 ASF1AQ9Y294 204 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 VWA7Q9Y334 891 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 IKBKGQ9Y6K9 419 aa15.37■□□□□ 0.05
C9orf3-219ENST00000488186 PIKFYVEQ9Y2I7 2098 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 A0A087WUV0 522 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 CXorf49A8MYA2 514 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-219ENST00000488186 OPA1O60313 960 aa15.36■□□□□ 0.05
C9orf3-219ENST00000488186 KDM1AO60341 852 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms