RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 TGFBIQ15582 683 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 MAP7D1Q3KQU3 841 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 SLC9B1Q4ZJI4 515 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 RPS27LQ71UM5 84 aaKnown RBP13.93□□□□□ -0.18
CUX1-209ENST00000487284 CUZD1Q86UP6 607 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 NLRP8Q86W28 1048 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 HORMAD1Q86X24 394 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 PELI3Q8N2H9 469 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 FAM126AQ9BYI3 521 aaPredicted RBP13.93□□□□□ -0.18
CUX1-209ENST00000487284 EPHX3Q9H6B9 360 aa13.93□□□□□ -0.18
CUX1-209ENST00000487284 WSB2Q9NYS7 404 aaPredicted RBP13.93□□□□□ -0.18
CUX1-209ENST00000487284 LRRC14BA6NHZ5 514 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CAPN14A8MX76 684 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 TMEM233B4DJY2 109 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 K7ESM1 405 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 KPNA5O15131 536 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 AXIN1O15169 862 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 HNRNPCL1O60812 293 aaKnown RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 PAK4O96013 591 aaPredicted RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 SOD1P00441 154 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 MSH3P20585 1137 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 CD6P30203 668 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 OXTRP30559 389 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 TBCCQ15814 346 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 PLEKHS1Q5SXH7 462 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 METTL21CQ5VZV1 264 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 NEK5Q6P3R8 708 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CYHR1Q6ZMK1 362 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 ASRGL1Q7L266 308 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 AFAP1L2Q8N4X5 818 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 FBXL6Q8N531 539 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 PDPRQ8NCN5 879 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 ZNF483Q8TF39 744 aaPredicted RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 TUBB6Q9BUF5 446 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CCDC106Q9BWC9 280 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 GPR174Q9BXC1 333 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 C1QTNF2Q9BXJ5 285 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 SLC17A9Q9BYT1 436 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 C6orf106Q9H6K1 298 aaPredicted RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 TNFRSF12AQ9NP84 129 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 TCF7L2Q9NQB0 619 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 PRMT8Q9NR22 394 aaPredicted RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 ARL8BQ9NVJ2 186 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CD274Q9NZQ7 290 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 INVSQ9Y283 1065 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 OARD1Q9Y530 152 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 TRPC5OSA6NMA1 111 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 RAD51BO15315 384 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 LAMTOR5O43504 91 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 NUAK1O60285 661 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 SNX2O60749 519 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 MTX2O75431 263 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CDK14O94921 469 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CBX6O95503 412 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 FTH1P02794 183 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 JUNP05412 331 aaKnown RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 AGERQ15109 404 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 FRA10AC1Q70Z53 315 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 DET1Q7L5Y6 550 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 PHYKPLQ8IUZ5 450 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 PTCD3Q96EY7 689 aaKnown RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 MAELQ96JY0 434 aaKnown RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 OR52B2Q96RD2 323 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CCDC28BQ9BUN5 200 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 NUF2Q9BZD4 464 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 LRMDAQ9H2I8 198 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 RDH14Q9HBH5 336 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 ARMCX1Q9P291 453 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 LNPEPQ9UIQ6 1025 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 PCTPQ9UKL6 214 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 ADAMTS6Q9UKP5 1117 aa13.92□□□□□ -0.18
CUX1-209ENST00000487284 CNOT6Q9ULM6 557 aaKnown RBP13.92□□□□□ -0.18
CUX1-209ENST00000487284 CEP192Q8TEP8 1941 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 CFAP73A6NFT4 308 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 C10orf142B7Z368 130 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 SLC31A1O15431 190 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 FGF4P08620 206 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 MPC1LP0DKB6 136 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 TDGF1P13385 188 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 AGTR2P50052 363 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 INHBCP55103 352 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 CDH13P55290 713 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 CLCQ05315 142 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 LCP2Q13094 533 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 SGCGQ13326 291 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 PDCD2Q16342 344 aaPredicted RBP13.91□□□□□ -0.18
CUX1-209ENST00000487284 WSCD2Q2TBF2 565 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 BMP8AQ7Z5Y6 402 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 TRIM69Q86WT6 500 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 TREML1Q86YW5 311 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 C1orf210Q8IVY1 113 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 MAML2Q8IZL2 1156 aaPredicted RBP13.91□□□□□ -0.18
CUX1-209ENST00000487284 RASGEF1AQ8N9B8 481 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 PLA2G15Q8NCC3 412 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 SLC7A6OSQ96CW6 309 aaPredicted RBP13.91□□□□□ -0.18
CUX1-209ENST00000487284 NSL1Q96IY1 281 aa13.91□□□□□ -0.18
CUX1-209ENST00000487284 NSUN5Q96P11 429 aaKnown RBP13.91□□□□□ -0.18
CUX1-209ENST00000487284 MYOCQ99972 504 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms