RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SLC20A1Q8WUM9 679 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 SLC38A5Q8WUX1 472 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 MRPS27Q92552 414 aaKnown RBP4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 NXNL1Q96CM4 212 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 PRMT6Q96LA8 375 aaPredicted RBP4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 CFAP57Q96MR6 1250 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 OR6C1Q96RD1 312 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 OLFM1Q99784 485 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 IL25Q9H293 177 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 SMARCAL1Q9NZC9 954 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 SIX4Q9UIU6 781 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 TMEM2Q9UHN6 1383 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 AFF2P51816 1311 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 IGLV5-37A0A075B6J1 123 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 OR2M5A3KFT3 312 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 SRRM3A6NNA2 597 aaPredicted RBP4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 HEPACAM2A8MVW5 462 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 TO15178 435 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 SSX4O60224 188 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 OAZ2O95190 189 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 PMS2P2O95744 297 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 QDPRP09417 244 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 CCDC175P0C221 793 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 LINC00205P59089 165 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 SLC20A2Q08357 652 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 COG2Q14746 738 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 GAGE2EQ4V326 116 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 CCDC184Q52MB2 194 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 RAB6CQ53S08 254 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 KRBOX4Q5JUW0 171 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 CST9LP1Q5W188 147 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 GAGE2AQ6NT46 116 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 Q75L30 129 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 CCDC186Q7Z3E2 898 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 TMPRSS12Q86WS5 348 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 ODF3L1Q8IXM7 274 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 C1orf52Q8N6N3 182 aaKnown RBP4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 B4GALNT2Q8NHY0 566 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 VOPP1Q96AW1 172 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 PHF21BQ96EK2 531 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 TMEM19Q96HH6 336 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 FAM81BQ96LP2 452 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 C16orf70Q9BSU1 422 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 NAA11Q9BSU3 229 aaPredicted RBP4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 SEZ6LQ9BYH1 1024 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 FAM129AQ9BZQ8 928 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 RAB6CQ9H0N0 254 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 LRMDAQ9H2I8 198 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 MRGBPQ9NV56 204 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 TMEM30AQ9NV96 361 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 ZNF224Q9NZL3 707 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 SELENONQ9NZV5 590 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 GAGE2DQ9UEU5 116 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 BRWD3Q6RI45 1802 aa4.81□□□□□ -1.64
PRPF38A-203ENST00000487160 CEP162Q5TB80 1403 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 NALCNQ8IZF0 1738 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 A0A0G2JPF8 293 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 LILRA5A6NI73 299 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 HNRNPCL3B7ZW38 293 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 TBCAO75347 108 aaKnown RBP4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 WISP2O76076 250 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 CAMTA2O94983 1202 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 FYNP06241 537 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 LINGO3P0C6S8 592 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 HNRNPCL4P0DMR1 293 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 PDLIM4P50479 330 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 RAB28P51157 221 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 TROAPQ12815 778 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 DLG1Q12959 904 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 TMEM35AQ53FP2 167 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 RNASEH2BQ5TBB1 312 aaKnown RBP4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 RAD9BQ6WBX8 426 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 GALNTL5Q7Z4T8 443 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 SATL1Q86VE3 508 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 TMEM173Q86WV6 379 aaPredicted RBP4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 PI4KAP1Q8N8J0 262 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 OR52I2Q8NH67 350 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 PPP4R1Q8TF05 950 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 HDAC11Q96DB2 347 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 SIPA1Q96FS4 1042 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 SPATA17Q96L03 361 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 FER1L6-AS2Q96M78 137 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 MS4A10Q96PG2 267 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 SLA2Q9H6Q3 261 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 NOL11Q9H8H0 719 aaKnown RBP4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 ANKZF1Q9H8Y5 726 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 CNOT10Q9H9A5 744 aaKnown RBP4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 RHCGQ9UBD6 479 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 TUBE1Q9UJT0 475 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 ANAPC5Q9UJX4 755 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 OR2W1Q9Y3N9 320 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 ASXL1Q8IXJ9 1541 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 ARHGAP31Q2M1Z3 1444 aa4.8□□□□□ -1.64
PRPF38A-203ENST00000487160 DUOX2Q9NRD8 1548 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 OR5K3A6NET4 321 aa4.79□□□□□ -1.64
PRPF38A-203ENST00000487160 ZNF587BE7ETH6 402 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms