RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 UBXN7O94888 489 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 PKMP14618 531 aaKnown RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 AMD1P17707 334 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 CD1CP29017 333 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 MRPS25P82663 173 aaKnown RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 GUCY2DQ02846 1103 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 GPR18Q14330 331 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 DNTTIP2Q5QJE6 756 aaKnown RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 LRRC8EQ6NSJ5 796 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 UGT3A1Q6NUS8 523 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 PALM2Q8IXS6 379 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 SLC22A15Q8IZD6 547 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 C2CD4AQ8NCU7 369 aaPredicted RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 FBXO25Q8TCJ0 367 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 TFGQ92734 400 aaPredicted RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 ZDHHC12Q96GR4 267 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 FOPNLQ96NB1 174 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 CMKLR1Q99788 373 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 LRRC1Q9BTT6 524 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 TRIT1Q9H3H1 467 aaKnown RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 SAYSD1Q9NPB0 183 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 IARS2Q9NSE4 1012 aaKnown RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 ZFATQ9P243 1243 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 ASF1AQ9Y294 204 aa14.3□□□□□ -0.12
LIMS3-205ENST00000487150 GOLGA4Q13439 2230 aaKnown RBP14.3□□□□□ -0.12
LIMS3-205ENST00000487150 TDRD6O60522 2096 aaKnown RBP14.29□□□□□ -0.12
LIMS3-205ENST00000487150 TOX3O15405 576 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-205ENST00000487150 B4GAT1O43505 415 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 SLCO2B1O94956 709 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 S1PR4O95977 384 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 PROS1P07225 676 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CHRM3P20309 590 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 AOAHP28039 575 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 FMO4P31512 558 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CCR7P32248 378 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CAPZBP47756 277 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
LIMS3-205ENST00000487150 MGAT5Q09328 741 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 HSPA14Q0VDF9 509 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CUL1Q13616 776 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 TMEM71Q6P5X7 295 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CYB5D1Q6P9G0 228 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 TTC23LQ6PF05 361 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 UNC5DQ6UXZ4 953 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 SLC26A11Q86WA9 606 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 OOSP2Q86WS3 158 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 DENND6AQ8IWF6 608 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 TBC1D21Q8IYX1 336 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CARFQ8N187 725 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 RAB42Q8N4Z0 105 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 WDR36Q8NI36 951 aaKnown RBP14.29□□□□□ -0.12
LIMS3-205ENST00000487150 MAGEC3Q8TD91 643 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 BIRC8Q96P09 236 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 INSM2Q96T92 566 aaPredicted RBP14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CD180Q99467 661 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 TRIM56Q9BRZ2 755 aaKnown RBP14.29□□□□□ -0.12
LIMS3-205ENST00000487150 RAB33BQ9H082 229 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 TXNDC16Q9P2K2 825 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 CRYL1Q9Y2S2 319 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 PCDHGA8Q9Y5G5 932 aa14.29□□□□□ -0.12
LIMS3-205ENST00000487150 FAM149AA5PLN7 773 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 EIF3FO00303 357 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ZNF500O60304 480 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 VPS26AO75436 327 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 GPC4O75487 556 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 BANF1O75531 89 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 CBSLP0DN79 551 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ERVK-10P10266 1014 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ENO3P13929 434 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 SPINK2P20155 84 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 STX2P32856 288 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 CBSP35520 551 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 CCNFP41002 786 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 SKIV2L2P42285 1042 aaKnown RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 PREPP48147 710 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 TUBB4BP68371 445 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 SLC7A5Q01650 507 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ZFP36L1Q07352 338 aaKnown RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 MN1Q10571 1320 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 PRKAA1Q13131 559 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 CTBP1Q13363 440 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 RTP5Q14D33 572 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 CTSL3PQ5NE16 218 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 PHF19Q5T6S3 580 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ARMC6Q6NXE6 501 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 UNQ6494/PRO21346Q6UXR6 183 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 CYS1Q717R9 158 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 CCDC25Q86WR0 208 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ZNF761Q86XN6 746 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ANKMY2Q8IV38 441 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 SLITRK4Q8IW52 837 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 DCUN1D3Q8IWE4 304 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 ZBTB2Q8N680 514 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 NOA1Q8NC60 698 aaKnown RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 PHC3Q8NDX5 983 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
LIMS3-205ENST00000487150 OR5K2Q8NHB8 316 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 NAT14Q8WUY8 206 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 NCSTNQ92542 709 aa14.28□□□□□ -0.12
LIMS3-205ENST00000487150 FERD3LQ96RJ6 166 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms