RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SULT1C3Q6IMI6 304 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 IMP3Q9NV31 184 aaKnown RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 FOCADQ5VW36 1801 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 KPNA5O15131 536 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 EFCAB14O75071 495 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 CST5P28325 142 aaPredicted RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 TNK2Q07912 1038 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 C22orf39Q6P5X5 142 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 GOLGA7Q7Z5G4 137 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 ATL1Q8WXF7 558 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 LINC00597Q9H2U6 94 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 NOL6Q9H6R4 1146 aaKnown RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 INSL6Q9Y581 213 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 CFAP20Q9Y6A4 193 aaKnown RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 M0R3G1 203 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 MAT2AP31153 395 aaKnown RBP13.01□□□□□ -0.33
HMGN1-216ENST00000486741 KIR3DL1P43629 444 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 PREPP48147 710 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 NFATC2Q13469 925 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 CCNIQ14094 377 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 PTGR1Q14914 329 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 SYVN1Q86TM6 617 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 LINC01599Q8WXQ3 324 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 TMCO1Q9UM00 188 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 TSC22D4Q9Y3Q8 395 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 ASB3Q9Y575 518 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 NUMA1Q14980 2115 aa13.01□□□□□ -0.33
HMGN1-216ENST00000486741 ATG13O75143 517 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 CLK1P49759 484 aaKnown RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 DNAJB13P59910 316 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 NFKB2Q00653 900 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 SLC5A9Q2M3M2 681 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 GALNT5Q7Z7M9 940 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 PPP1R16AQ96I34 528 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 DACH2Q96NX9 599 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 GPSM3Q9Y4H4 160 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 LRRC42Q9Y546 428 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 FADS3Q9Y5Q0 445 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 CAPN14A8MX76 684 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 TRBC1P01850 177 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 HSMCR30P0CW71 290 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 MYCLP1P12525 358 aaPredicted RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 PCYT1AP49585 367 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 PTCHD3Q3KNS1 767 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 PSRC1Q6PGN9 363 aaPredicted RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 TPRG1Q6ZUI0 275 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 TBC1D19Q8N5T2 526 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 ZNF614Q8N883 585 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 ENDOVQ8N8Q3 282 aaKnown RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 KCNJ9Q92806 393 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 MYEOVQ96EZ4 313 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 YIPF2Q9BWQ6 316 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 POLR1BQ9H9Y6 1135 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 NDUFA13Q9P0J0 144 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 COQ6Q9Y2Z9 468 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 CHRM1P11229 460 aaPredicted RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 GRK3P35626 688 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 CTSOP43234 321 aaPredicted RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 RPL5P46777 297 aaKnown RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 IDH2P48735 452 aaKnown RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 GPRC6AQ5T6X5 926 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 MMAAQ8IVH4 418 aaKnown RBP13□□□□□ -0.33
HMGN1-216ENST00000486741 ANKLE1Q8NAG6 615 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 ARMC7Q9H6L4 198 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 ZDHHC3Q9NYG2 299 aa13□□□□□ -0.33
HMGN1-216ENST00000486741 TMEM189-UBE2V1I3L0A0 370 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 MAP3K13O43283 966 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ZBTB11O95625 1053 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 GBAP04062 536 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 FDXRP22570 491 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 PSMB9P28065 219 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CNTN1Q12860 1018 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 MAVSQ7Z434 540 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 SLC13A3Q8WWT9 602 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 COL26A1Q96A83 441 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CHID1Q9BWS9 393 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 OSBPL11Q9BXB4 747 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 TLR9Q9NR96 1032 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 BACE2Q9Y5Z0 518 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 CLIC3O95833 236 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 PCCBP05166 539 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 MTHFRP42898 656 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 GSK3BP49841 420 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 DAB2P98082 770 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 MS4A2Q01362 244 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 SEMA3AQ14563 771 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 SATL1Q86VE3 508 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ASB9Q96DX5 294 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 RMI1Q9H9A7 625 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 C1orf109Q9NX04 203 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 DOLKQ9UPQ8 538 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 C1QTNF3-AMACRE9PGA6 284 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ERAL1O75616 437 aaKnown RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 RNASEH2AO75792 299 aaKnown RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 RECQL5O94762 991 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ACADMP11310 421 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 ADRA1AP35348 466 aa12.99□□□□□ -0.33
HMGN1-216ENST00000486741 HPCAL1P37235 193 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms