RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 RPL26P61254 145 aaKnown RBP8.65□□□□□ -1.02
GABRE-209ENST00000486255 ZNF311Q5JNZ3 666 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 PAMR1Q6UXH9 720 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 LRRN1Q6UXK5 716 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 LHFPL3Q86UP9 236 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 C11orf65Q8NCR3 313 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 SLC7A6OSQ96CW6 309 aaPredicted RBP8.65□□□□□ -1.02
GABRE-209ENST00000486255 PGLYRP2Q96PD5 576 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 CADM1Q9BY67 442 aaKnown RBP8.65□□□□□ -1.02
GABRE-209ENST00000486255 DHX33Q9H6R0 707 aaKnown RBP8.65□□□□□ -1.02
GABRE-209ENST00000486255 C14orf166Q9Y224 244 aaKnown RBP8.65□□□□□ -1.02
GABRE-209ENST00000486255 TNFSF13BQ9Y275 285 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 MYPNQ86TC9 1320 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 FAM155BO75949 473 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 CYB5AP00167 134 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 ZNF3P17036 446 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 HK1P19367 917 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 ASMTP46597 345 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 GBX2P52951 348 aaPredicted RBP8.65□□□□□ -1.02
GABRE-209ENST00000486255 SLC10A7Q0GE19 358 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 ILF3Q12906 894 aaKnown RBP eCLIP8.65□□□□□ -1.02
GABRE-209ENST00000486255 ZNF662Q6ZS27 426 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 ZDHHC21Q8IVQ6 265 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 PHTF2Q8N3S3 785 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 LIX1Q8N485 282 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 C1orf216Q8TAB5 229 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 LRRN4Q8WUT4 740 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 ZNF347Q96SE7 839 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 TRMOQ9BU70 441 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 ULBP1Q9BZM6 244 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 BRINP2Q9C0B6 783 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 ATP13A3Q9H7F0 1226 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 SMPD4Q9NXE4 827 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 TAS2R3Q9NYW6 316 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 TVP23BQ9NYZ1 205 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 RIMKLBQ9ULI2 386 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 RABL2BQ9UNT1 228 aa8.65□□□□□ -1.02
GABRE-209ENST00000486255 TVP23AA6NH52 213 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 ISM1B1AKI9 464 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 CALCAP01258 141 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 RPS3P23396 243 aaKnown RBP eCLIP8.65□□□□□ -1.03
GABRE-209ENST00000486255 GNPDA1P46926 289 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 C2orf80Q0P641 193 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 FAPQ12884 760 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 SEMA3AQ14563 771 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 IQCCQ4KMZ1 466 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 ATP13A4Q4VNC1 1196 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 HECTD2Q5U5R9 776 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 TIGD4Q8IY51 512 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 FITM2Q8N6M3 262 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 PRELID2Q8N945 189 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 OR2AJ1Q8NGZ0 328 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 ZSWIM3Q96MP5 696 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 RPL36Q9Y3U8 105 aaKnown RBP8.65□□□□□ -1.03
GABRE-209ENST00000486255 ABCA3Q99758 1704 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 ILVBLA1L0T0 632 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 A8MV72 311 aaPredicted RBP8.65□□□□□ -1.03
GABRE-209ENST00000486255 M0R233 179 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 ZNF286BP0CG31 522 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 COL6A1P12109 1028 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 ZNF20P17024 532 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 BDNFP23560 247 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 CYP2C18P33260 490 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 SLC18A2Q05940 514 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 BNIP3Q12983 259 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 PUM1Q14671 1186 aaKnown RBP eCLIP8.65□□□□□ -1.035e-10■■■□□ 14.9
GABRE-209ENST00000486255 SLC1A5Q15758 541 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 TMEM44Q2T9K0 475 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 ARSHQ5FYA8 562 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 RALGPS1Q5JS13 557 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 CEP68Q76N32 757 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 CMC1Q7Z7K0 106 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 RANBP3LQ86VV4 465 aaPredicted RBP8.65□□□□□ -1.03
GABRE-209ENST00000486255 GMCL1P1Q8NEA9 526 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 CREB3L1Q96BA8 519 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 COQ8BQ96D53 544 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 TBX5Q99593 518 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 TBCCD1Q9NVR7 557 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 MOCS1Q9NZB8 636 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 CFAP97Q9P2B7 532 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 PCDH10Q9P2E7 1040 aa8.65□□□□□ -1.03
GABRE-209ENST00000486255 PLD2O14939 933 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 ASLP04424 464 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 CYP11A1P05108 521 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 MECP2P51608 486 aaKnown RBP8.64□□□□□ -1.03
GABRE-209ENST00000486255 NPTX1Q15818 432 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 C12orf50Q8NA57 414 aaPredicted RBP8.64□□□□□ -1.03
GABRE-209ENST00000486255 SLC43A3Q8NBI5 491 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 KAT2AQ92830 837 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 MRPL45Q9BRJ2 306 aaKnown RBP8.64□□□□□ -1.03
GABRE-209ENST00000486255 KANSL3Q9P2N6 904 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 FARSAQ9Y285 508 aaKnown RBP8.64□□□□□ -1.03
GABRE-209ENST00000486255 SPIN1Q9Y657 262 aaPredicted RBP8.64□□□□□ -1.03
GABRE-209ENST00000486255 WASF2Q9Y6W5 498 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 PAPPAQ13219 1627 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 TPST2O60704 377 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 CHRM5P08912 532 aaPredicted RBP8.64□□□□□ -1.03
GABRE-209ENST00000486255 RAP2AP10114 183 aa8.64□□□□□ -1.03
GABRE-209ENST00000486255 GPD2P43304 727 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms