RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 HSDL1Q3SXM5 330 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 PDLIM3Q53GG5 364 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 TEX44Q53QW1 395 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 XKR4Q5GH76 650 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 CEP85LQ5SZL2 805 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 C6orf163Q5TEZ5 329 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 LCN1P1Q5VSP4 162 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MLIPQ5VWP3 458 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 NKAIN2Q5VXU1 208 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 PLCXD3Q63HM9 321 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 LRRC66Q68CR7 880 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 NCR3LG1Q68D85 454 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 KRT39Q6A163 491 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 KIAA0930Q6ICG6 404 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 SLC25A25Q6KCM7 469 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 RGS7BPQ6MZT1 257 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 TMEM71Q6P5X7 295 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 PAOXQ6QHF9 649 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 NHLRC1Q6VVB1 395 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 ETV3LQ6ZN32 361 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 ANO5Q75V66 913 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 NDUFAF7Q7L592 441 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 FAM122BQ7Z309 247 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 ABI3BPQ7Z7G0 1075 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 LINC00523Q86TU6 105 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 CCDC25Q86WR0 208 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 NUDCD3Q8IVD9 361 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 NELFCDQ8IXH7 590 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MB21D2Q8IYB1 491 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 DSELQ8IZU8 1212 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MMP21Q8N119 569 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 SNX31Q8N9S9 440 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 C8orf58Q8NAV2 365 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 STKLD1Q8NE28 680 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 FAM71CQ8NEG0 241 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 OR56B1Q8NGI3 324 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 OR52B4Q8NGK2 314 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 OR2I1PQ8NGU4 316 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.44□□□□□ -1.86
FXN-204ENST00000484259 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 DTX3LQ8TDB6 740 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 PTPMT1Q8WUK0 201 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 KLHL29Q96CT2 875 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 OTUB2Q96DC9 234 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 SNRNP40Q96DI7 357 aaKnown RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 DTD2Q96FN9 168 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 CHAMP1Q96JM3 812 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 SERAC1Q96JX3 654 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 SENP8Q96LD8 212 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 FAM227BQ96M60 508 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 SRSF8Q9BRL6 282 aaKnown RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 CNPY3Q9BT09 278 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 ALKBH7Q9BT30 221 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 CDADC1Q9BWV3 514 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 IDI2Q9BXS1 227 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 NLNQ9BYT8 704 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MFFQ9GZY8 342 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 HRH4Q9H3N8 390 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 POFUT1Q9H488 388 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 CATSPERBQ9H7T0 1116 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MANSC1Q9H8J5 431 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 SYNPO2LQ9H987 977 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 VAT1LQ9HCJ6 419 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MMP25Q9NPA2 562 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 C12orf4Q9NQ89 552 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 FAM207AQ9NSI2 230 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 TXLNGQ9NUQ3 528 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 OLAHQ9NV23 265 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MRPL22Q9NWU5 206 aaKnown RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 EURLQ9NYK6 297 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 HAO2Q9NYQ3 351 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 GPRC5DQ9NZD1 345 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 PDP1Q9P0J1 537 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 SERGEFQ9UGK8 458 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 CIDEBQ9UHD4 219 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 UBQLN2Q9UHD9 624 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 IL17BQ9UHF5 180 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MAGEL2Q9UJ55 1249 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 TRPC5Q9UL62 973 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 CDH9Q9ULB4 789 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 RNF24Q9Y225 148 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 OSGIN2Q9Y236 505 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 PLLPQ9Y342 182 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 STARD13Q9Y3M8 1113 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 RNF114Q9Y508 228 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 KCTD3Q9Y597 815 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 ABCA9Q8IUA7 1624 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 TROQ12816 1431 aaPredicted RBP3.44□□□□□ -1.86
FXN-204ENST00000484259 CEP162Q5TB80 1403 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 MAST3O60307 1309 aa3.44□□□□□ -1.86
FXN-204ENST00000484259 CFAP74Q9C0B2 1584 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 MTUS2Q5JR59 1369 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 TRBV23OR9-2A0A075B6M9 112 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 TRAV25A0A0B4J276 109 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 TEX13CA0A0J9YWL9 993 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 A0A1W2PNR3 127 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 A0A1W2PPV4 95 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 UBA6A0AVT1 1052 aaPredicted RBP3.43□□□□□ -1.86
FXN-204ENST00000484259 PIPSLA2A3N6 862 aa3.43□□□□□ -1.86
FXN-204ENST00000484259 C2orf78A6NCI8 922 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms