RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 COPS8Q99627 209 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 ZPBPQ9BS86 351 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 SPRY4Q9C004 299 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 TRIT1Q9H3H1 467 aaKnown RBP9.8□□□□□ -0.84
CPSF4-213ENST00000484112 XAB2Q9HCS7 855 aaKnown RBP9.8□□□□□ -0.84
CPSF4-213ENST00000484112 PDP2Q9P2J9 529 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 FKBPLQ9UIM3 349 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 CRLS1Q9UJA2 301 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 TMPRSS11EQ9UL52 423 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 TCAF1Q9Y4C2 921 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 PCDHB3Q9Y5E6 796 aa9.8□□□□□ -0.84
CPSF4-213ENST00000484112 PTPN13Q12923 2485 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 IGLV3-16A0A075B6K0 115 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 C17orf113A0A1B0GUU1 675 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 K7EM74 188 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ZNF185O15231 689 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 BUD23O43709 281 aaKnown RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 KATNA1O75449 491 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 AP2A2O94973 939 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 F3P13726 295 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ZNF7P17097 686 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 TPH1P17752 444 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ACRV1P26436 265 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 AKT1P31749 480 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 MC4RP32245 332 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 DLSTP36957 453 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 GPS1Q13098 491 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 PTK6Q13882 451 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ERV3-1Q14264 604 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ITIH4Q14624 930 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 KCNJ11Q14654 390 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 PPP1R7Q15435 360 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 AARS2Q5JTZ9 985 aaKnown RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 TSTD2Q5T7W7 516 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 WDR74Q6RFH5 385 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 AFTPHQ6ULP2 937 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ARHGAP22Q7Z5H3 698 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 HOOK3Q86VS8 718 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 AMZ2Q86W34 360 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 TRAPPC5Q8IUR0 188 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 RBM12BQ8IXT5 1001 aaKnown RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 SFRP1Q8N474 314 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ESX1Q8N693 406 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 DNAJC1Q96KC8 554 aaKnown RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 EPB41L1Q9H4G0 881 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 VPS37BQ9H9H4 285 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 UCK1Q9HA47 277 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 SARS2Q9NP81 518 aaKnown RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 FBXO8Q9NRD0 319 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 ZDHHC3Q9NYG2 299 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 KCNK6Q9Y257 313 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 TMEM184BQ9Y519 407 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-213ENST00000484112 RPS6KL1Q9Y6S9 549 aa9.79□□□□□ -0.84
CPSF4-213ENST00000484112 A6NCN8 305 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 MKRN2OSH3BPM6 223 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 KIF2AO00139 706 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 UGT1A9O60656 530 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 VPS4BO75351 444 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 AGFG2O95081 481 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ACP5P13686 325 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ATP1B2P14415 290 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 XRCC1P18887 633 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 UGT1A6P19224 532 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 IDSP22304 550 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 UGT1A1P22309 533 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 UGT1A4P22310 534 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 F8A1P23610 371 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 CASQ1P31415 396 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 STAT5AP42229 794 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 NSG1P42857 185 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 DHX34Q14147 1143 aaKnown RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 INSCQ1MX18 579 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 IYDQ6PHW0 289 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ABRAXAS1Q6UWZ7 409 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 PACS1Q6VY07 963 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ASB18Q6ZVZ8 466 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 C11orf96Q7Z7L8 435 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 PRUNE1Q86TP1 453 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 SLC9B2Q86UD5 537 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ZNF547Q8IVP9 402 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 PPIL6Q8IXY8 311 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 MPP5Q8N3R9 675 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 TAB3Q8N5C8 712 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-213ENST00000484112 RASGEF1AQ8N9B8 481 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 OR13J1Q8NGT2 312 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 OR2L2Q8NH16 312 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 CPT1BQ92523 772 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ELMO2Q96JJ3 720 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 KIFC1Q9BW19 673 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 TBC1D10AQ9BXI6 508 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ULBP3Q9BZM4 244 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 UGT1A7Q9HAW7 530 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 UGT1A10Q9HAW8 530 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 UGT1A8Q9HAW9 530 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 KLC4Q9NSK0 619 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 TBC1D29Q9UFV1 150 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 ACSL5Q9ULC5 683 aa9.78□□□□□ -0.84
CPSF4-213ENST00000484112 VPS4AQ9UN37 437 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms