RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 UBE2ZQ9H832 354 aaPredicted RBP25.74■■□□□ 1.71
SHOX2-204ENST00000483851 PARVBQ9HBI1 364 aa25.74■■□□□ 1.71
SHOX2-204ENST00000483851 C5orf42Q9H799 3197 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 GFYI3L273 518 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 TEAD1P28347 426 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 CPA2P48052 419 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 CCR3P51677 355 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 BOP1Q14137 746 aaKnown RBP25.73■■□□□ 1.71
SHOX2-204ENST00000483851 PON2Q15165 354 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 PHKG1Q16816 387 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 RASGRP3Q8IV61 690 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 RHBDF1Q96CC6 855 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 ZBTB26Q9HCK0 441 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 SEMA4BQ9NPR2 832 aaPredicted RBP25.73■■□□□ 1.71
SHOX2-204ENST00000483851 PFDN4Q9NQP4 134 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 HEBP1Q9NRV9 189 aa25.73■■□□□ 1.71
SHOX2-204ENST00000483851 OR2AG2A6NM03 316 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 E9PBE3 544 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 INPP4BO15327 924 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 KLHL41O60662 606 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 JUNP05412 331 aaKnown RBP25.72■■□□□ 1.71
SHOX2-204ENST00000483851 ANXA5P08758 320 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 TSPAN8P19075 237 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 FBXO43Q4G163 708 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 DLG3Q92796 817 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 CCT7Q99832 543 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 LIMD1Q9UGP4 676 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 EIF2B4Q9UI10 523 aaKnown RBP25.72■■□□□ 1.71
SHOX2-204ENST00000483851 GPR34Q9UPC5 381 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 RPIAP49247 311 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 CTSCP53634 463 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 AP1S2P56377 157 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 GTF2H3Q13889 308 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 TMEM220Q6QAJ8 160 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 MCUR1Q96AQ8 359 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 TMEM159Q96B96 161 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 CMTM5Q96DZ9 223 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 HIC2Q96JB3 615 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 LINC00615Q96LM1 132 aaPredicted RBP25.72■■□□□ 1.71
SHOX2-204ENST00000483851 EGFL8Q99944 293 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 DNAJC15Q9Y5T4 150 aa25.72■■□□□ 1.71
SHOX2-204ENST00000483851 TNRC18O15417 2968 aaPredicted RBP25.72■■□□□ 1.71
SHOX2-204ENST00000483851 LMNAP02545 664 aaKnown RBP25.71■■□□□ 1.71
SHOX2-204ENST00000483851 DNTTP04053 509 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 HIST1H2AGP0C0S8 130 aaPredicted RBP25.71■■□□□ 1.71
SHOX2-204ENST00000483851 HOXB2P14652 356 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 HIST1H2ADP20671 130 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 CYP2A7P20853 494 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 GGT5P36269 586 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 PGM1P36871 562 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 PIK3CGP48736 1102 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 HNMTP50135 292 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 UBE2R2Q712K3 238 aaPredicted RBP25.71■■□□□ 1.71
SHOX2-204ENST00000483851 ADGRG6Q86SQ4 1221 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 HIST1H2AHQ96KK5 128 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 HIST1H2AJQ99878 128 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 TACO1Q9BSH4 297 aaKnown RBP25.71■■□□□ 1.71
SHOX2-204ENST00000483851 H2AFJQ9BTM1 129 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 CD244Q9BZW8 370 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 ZNF385DQ9H6B1 395 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 DCLRE1BQ9H816 532 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 TSR3Q9UJK0 312 aaKnown RBP25.71■■□□□ 1.71
SHOX2-204ENST00000483851 ANKRD12Q6UB98 2062 aa25.71■■□□□ 1.71
SHOX2-204ENST00000483851 C17orf113A0A1B0GUU1 675 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 A0A1W2PP55 124 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 SLC5A10A0PJK1 596 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 PABPN1LA6NDY0 278 aaKnown RBP25.7■■□□□ 1.71
SHOX2-204ENST00000483851 K7ESM1 405 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 ADAM23O75077 832 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 SKAP2O75563 359 aaPredicted RBP25.7■■□□□ 1.71
SHOX2-204ENST00000483851 PCDH8O95206 1070 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 MATN4O95460 622 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 UROSP10746 265 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 CPOXP36551 454 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 PLOD1Q02809 727 aaPredicted RBP25.7■■□□□ 1.71
SHOX2-204ENST00000483851 SFSWAPQ12872 951 aaKnown RBP25.7■■□□□ 1.71
SHOX2-204ENST00000483851 ZNF648Q5T619 568 aaPredicted RBP25.7■■□□□ 1.71
SHOX2-204ENST00000483851 CLEC6AQ6EIG7 209 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 KIAA1211LQ6NV74 962 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 PNCKQ6P2M8 343 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 GPRIN3Q6ZVF9 776 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 CHSY3Q70JA7 882 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 PELI3Q8N2H9 469 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 C19orf60Q96EN9 201 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 COX14Q96I36 57 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 WWOXQ9NZC7 414 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 PDE10AQ9Y233 779 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 FIS1Q9Y3D6 152 aa25.7■■□□□ 1.71
SHOX2-204ENST00000483851 A0A1W2PQF6 199 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 PPP6CO00743 305 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 LIN7AO14910 233 aaPredicted RBP25.7■■□□□ 1.7
SHOX2-204ENST00000483851 TAPBPO15533 448 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 VPS4BO75351 444 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 RNASEH2AO75792 299 aaKnown RBP25.7■■□□□ 1.7
SHOX2-204ENST00000483851 KLF8O95600 359 aaPredicted RBP25.7■■□□□ 1.7
SHOX2-204ENST00000483851 CHEK2O96017 543 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 IRX1P78414 480 aaPredicted RBP25.7■■□□□ 1.7
SHOX2-204ENST00000483851 SYTL3Q4VX76 610 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 NXNQ6DKJ4 435 aa25.7■■□□□ 1.7
SHOX2-204ENST00000483851 KIAA1161Q6NSJ0 714 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms