RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 A0A096LPK6 155 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 A0A1W2PPM1 405 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 LNP1A1A4G5 178 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 NEMP2A6NFY4 417 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 GOLGA6L10A6NI86 522 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 PDZK1P1A8MUH7 402 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 LMO7DNF2Z398 122 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 YY2O15391 372 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 RFPL1O75677 317 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 SASH3O75995 380 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 C2P06681 752 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 SLC35G4P0C7Q5 338 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 MYZAPP0CAP1 466 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 SLC35E2BP0CK96 405 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 CBSLP0DN79 551 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 ENO3P13929 434 aaPredicted RBP11.98□□□□□ -0.49
SDC1-206ENST00000482879 ZNF37AP17032 561 aaPredicted RBP11.98□□□□□ -0.49
SDC1-206ENST00000482879 EPHA8P29322 1005 aaPredicted RBP11.98□□□□□ -0.49
SDC1-206ENST00000482879 CBSP35520 551 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 MAGEA12P43365 314 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 NHLH1Q02575 133 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 ABRQ12979 859 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 GBX1Q14549 363 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 CSRP2Q16527 193 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 DEFB133Q30KQ1 61 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 PPM1JQ5JR12 505 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 CCDC91Q7Z6B0 441 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 TBC1D1Q86TI0 1168 aaPredicted RBP11.98□□□□□ -0.49
SDC1-206ENST00000482879 GATAD2AQ86YP4 633 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 SLC22A15Q8IZD6 547 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 SLC25A45Q8N413 288 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 NKAPQ8N5F7 415 aaKnown RBP11.98□□□□□ -0.49
SDC1-206ENST00000482879 MINDY1Q8N5J2 469 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 FAM46DQ8NEK8 389 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 SKA2Q8WVK7 121 aaPredicted RBP11.98□□□□□ -0.49
SDC1-206ENST00000482879 GLMNQ92990 594 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 ISL2Q96A47 359 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 LINGO1Q96FE5 620 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 OR52A5Q9H2C5 316 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 DPEP2Q9H4A9 486 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 ACOT9Q9Y305 439 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 FAM186AA6NE01 2351 aa11.98□□□□□ -0.49
SDC1-206ENST00000482879 TRBV23OR9-2A0A075B6M9 112 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 A0A087X1B8 175 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 GOLGA8RI6L899 631 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 AGPSO00116 658 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 EIF3FO00303 357 aaPredicted RBP11.97□□□□□ -0.49
SDC1-206ENST00000482879 IFRD1O00458 451 aaPredicted RBP11.97□□□□□ -0.49
SDC1-206ENST00000482879 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
SDC1-206ENST00000482879 EML2O95834 649 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 CCDC166P0CW27 439 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 MPC1LP0DKB6 136 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 PYGBP11216 843 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 ATP5DP30049 168 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 GMPRP36959 345 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 HALP42357 657 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 CSRP3P50461 194 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 CSHL1Q14406 222 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 UAP1L1Q3KQV9 507 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 AGAP9Q5VTM2 703 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 LVRNQ6Q4G3 990 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 ABRAXAS1Q6UWZ7 409 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 WASH2PQ6VEQ5 465 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 CYHR1Q6ZMK1 362 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 PIWIL4Q7Z3Z4 852 aaKnown RBP11.97□□□□□ -0.49
SDC1-206ENST00000482879 TRABD2AQ86V40 505 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 MYO1HQ8N1T3 1032 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 SPATA6LQ8N4H0 392 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 SPDYE1Q8NFV5 336 aaPredicted RBP11.97□□□□□ -0.49
SDC1-206ENST00000482879 CFAP61Q8NHU2 1237 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 ACMSDQ8TDX5 336 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 SAP25Q8TEE9 199 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 ZDHHC1Q8WTX9 485 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 ANKRD49Q8WVL7 239 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 PGM2Q96G03 612 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 CABS1Q96KC9 395 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 RMDN2Q96LZ7 410 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 PHOX2BQ99453 314 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 ACBD3Q9H3P7 528 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 TMBIM4Q9HC24 238 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 WASH6PQ9NQA3 447 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 RAPGEFL1Q9UHV5 662 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 PCOLCE2Q9UKZ9 415 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 WDR37Q9Y2I8 494 aa11.97□□□□□ -0.49
SDC1-206ENST00000482879 PCM1Q15154 2024 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 B4DGG1 531 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 FFAR2O15552 330 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 OPA1O60313 960 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 PCDHGA12O60330 932 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 TSPAN12O95859 305 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 LTA4HP09960 611 aaKnown RBP11.96□□□□□ -0.49
SDC1-206ENST00000482879 F3P13726 295 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 BRAFP15056 766 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 ACADLP28330 430 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 IRF9Q00978 393 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 CLCA4Q14CN2 919 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 SUZ12Q15022 739 aaKnown RBP11.96□□□□□ -0.49
SDC1-206ENST00000482879 RPE65Q16518 533 aa11.96□□□□□ -0.49
SDC1-206ENST00000482879 CAPRIN2Q6IMN6 1127 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms