RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TRIM51Q9BSJ1 452 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 AKAP7Q9P0M2 348 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 SEMA5BQ9P283 1151 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 ATXN7L1Q9ULK2 861 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 UTP11Q9Y3A2 253 aaKnown RBP15.11■□□□□ 0.01
C9orf3-217ENST00000479161 MAD1L1Q9Y6D9 718 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 COMMD10Q9Y6G5 202 aa15.11■□□□□ 0.01
C9orf3-217ENST00000479161 PLD2O14939 933 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 CASC3O15234 703 aaKnown RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 EIF3HO15372 352 aaKnown RBP eCLIP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 RAD51CO43502 376 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 URI1O94763 535 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 S1PR4O95977 384 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 ITGA2BP08514 1039 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 AOAHP28039 575 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 CSF2RBP32927 897 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 CAPZBP47756 277 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 TERF1P54274 439 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 DHX9Q08211 1270 aaKnown RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 ILF2Q12905 390 aaKnown RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 CALCOCO2Q13137 446 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 THOC5Q13769 683 aaKnown RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 CRYMQ14894 314 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 KCTD19Q17RG1 926 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 AMZ1Q400G9 498 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 MSS51Q4VC12 460 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 STEAP4Q687X5 459 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 KIAA0408Q6ZU52 694 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 USP53Q70EK8 1073 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 CENPUQ71F23 418 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 RAB11FIP2Q7L804 512 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 PROSER1Q86XN7 944 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 MARCH9Q86YJ5 346 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 CNTN4Q8IWV2 1026 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 SLC22A15Q8IZD6 547 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 LILRA3Q8N6C8 439 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 MNS1Q8NEH6 495 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 ACVR1CQ8NER5 493 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 SEC14L1Q92503 715 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 ELMO1Q92556 727 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 TFGQ92734 400 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 RMDN2Q96LZ7 410 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 FAM167BQ9BTA0 163 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 FOXP3Q9BZS1 431 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 SEMA6CQ9H3T2 930 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 TFB2MQ9H5Q4 396 aaKnown RBP15.1■□□□□ 0.01
C9orf3-217ENST00000479161 RDH14Q9HBH5 336 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 OGFRQ9NZT2 677 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 ACSL6Q9UKU0 697 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 PSMD13Q9UNM6 376 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 PCDHGA7Q9Y5G6 932 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 MRFAP1Q9Y605 127 aa15.1■□□□□ 0.01
C9orf3-217ENST00000479161 A0A1W2PNU3 283 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 CDRT15L2A8MXV6 281 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 BHMG1C9JSJ3 638 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 MATN2O00339 956 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 KRT37O76014 449 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 APOA4P06727 396 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 HOXB3P14651 431 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 PDHA2P29803 388 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 ATP5DP30049 168 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 CCR7P32248 378 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 GABREP78334 506 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 CYP4F3Q08477 520 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 BOP1Q14137 746 aaKnown RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 GBX1Q14549 363 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 TBC1D25Q3MII6 688 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 PLEKHS1Q5SXH7 462 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 PTRHD1Q6GMV3 140 aaKnown RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 CYS1Q717R9 158 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 CLEC14AQ86T13 490 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 TBC1D21Q8IYX1 336 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 AGBL5Q8NDL9 886 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 SNIP1Q8TAD8 396 aaKnown RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 ZDHHC12Q96GR4 267 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 CD180Q99467 661 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 TBC1D10AQ9BXI6 508 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 FAM129AQ9BZQ8 928 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 TWSG1Q9GZX9 223 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 SYNDIG1Q9H7V2 258 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 ASCL3Q9NQ33 180 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 IMP3Q9NV31 184 aaKnown RBP15.09■□□□□ 0.01
C9orf3-217ENST00000479161 POLG2Q9UHN1 485 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 SLC24A2Q9UI40 661 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 SATB2Q9UPW6 733 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 CDYLQ9Y232 598 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 AK5Q9Y6K8 562 aa15.09■□□□□ 0.01
C9orf3-217ENST00000479161 B4E171 279 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 NVLO15381 856 aaKnown RBP15.08■□□□□ 0
C9orf3-217ENST00000479161 KDM1AO60341 852 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 AMD1P17707 334 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 CD9P21926 228 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 TSPAN7P41732 249 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 LEPRP48357 1165 aaKnown RBP15.08■□□□□ 0
C9orf3-217ENST00000479161 TMED2Q15363 201 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 BBS9Q3SYG4 887 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 NKAIN2Q5VXU1 208 aa15.08■□□□□ 0
C9orf3-217ENST00000479161 ZNF470Q6ECI4 717 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms