RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PWWP2AQ96N64 755 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 CCDC86Q9H6F5 360 aaKnown RBP20.01■□□□□ 0.79
VARS-224ENST00000479051 TEX264Q9Y6I9 313 aa20.01■□□□□ 0.79
VARS-224ENST00000479051 SLC5A10A0PJK1 596 aa20■□□□□ 0.79
VARS-224ENST00000479051 C1QTNF9BB2RNN3 333 aa20■□□□□ 0.79
VARS-224ENST00000479051 EIF3HO15372 352 aaKnown RBP eCLIP20■□□□□ 0.79
VARS-224ENST00000479051 C1QTNF9P0C862 333 aa20■□□□□ 0.79
VARS-224ENST00000479051 PDHA2P29803 388 aa20■□□□□ 0.79
VARS-224ENST00000479051 FMO4P31512 558 aa20■□□□□ 0.79
VARS-224ENST00000479051 CSF2RBP32927 897 aa20■□□□□ 0.79
VARS-224ENST00000479051 LIMK2P53671 638 aa20■□□□□ 0.79
VARS-224ENST00000479051 ZFP36L1Q07352 338 aaKnown RBP20■□□□□ 0.79
VARS-224ENST00000479051 HSPA14Q0VDF9 509 aa20■□□□□ 0.79
VARS-224ENST00000479051 TRA2AQ13595 282 aaKnown RBP eCLIP20■□□□□ 0.79
VARS-224ENST00000479051 RTP5Q14D33 572 aa20■□□□□ 0.79
VARS-224ENST00000479051 HSP90AA5PQ58FG0 334 aa20■□□□□ 0.79
VARS-224ENST00000479051 C3orf38Q5JPI3 329 aa20■□□□□ 0.79
VARS-224ENST00000479051 HP1BP3Q5SSJ5 553 aaPredicted RBP20■□□□□ 0.79
VARS-224ENST00000479051 XKR5Q6UX68 686 aa20■□□□□ 0.79
VARS-224ENST00000479051 OTOAQ7RTW8 1153 aa20■□□□□ 0.79
VARS-224ENST00000479051 SLITRK4Q8IW52 837 aa20■□□□□ 0.79
VARS-224ENST00000479051 LSMEM2Q8N112 164 aa20■□□□□ 0.79
VARS-224ENST00000479051 CEP112Q8N8E3 955 aa20■□□□□ 0.79
VARS-224ENST00000479051 TFGQ92734 400 aaPredicted RBP20■□□□□ 0.79
VARS-224ENST00000479051 FERD3LQ96RJ6 166 aa20■□□□□ 0.79
VARS-224ENST00000479051 CMKLR1Q99788 373 aa20■□□□□ 0.79
VARS-224ENST00000479051 TMEM121BQ9BXQ6 578 aaPredicted RBP20■□□□□ 0.79
VARS-224ENST00000479051 MVB12BQ9H7P6 319 aa20■□□□□ 0.79
VARS-224ENST00000479051 POLR1BQ9H9Y6 1135 aa20■□□□□ 0.79
VARS-224ENST00000479051 PPANQ9NQ55 473 aaKnown RBP20■□□□□ 0.79
VARS-224ENST00000479051 IARS2Q9NSE4 1012 aaKnown RBP20■□□□□ 0.79
VARS-224ENST00000479051 CRYL1Q9Y2S2 319 aa20■□□□□ 0.79
VARS-224ENST00000479051 CEP295Q9C0D2 2601 aa20■□□□□ 0.79
VARS-224ENST00000479051 IQCF5A8MTL0 148 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 E5RI56 91 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 E7ESA3 106 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 TP73O15350 636 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 TYRP1P17643 537 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 CCR7P32248 378 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 SLC1A2P43004 574 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 LSSP48449 732 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 GABREP78334 506 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 CTBP1Q13363 440 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 DUS1LQ6P1R4 473 aaKnown RBP19.99■□□□□ 0.79
VARS-224ENST00000479051 RAB11FIP2Q7L804 512 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 ANKMY2Q8IV38 441 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 IGDCC3Q8IVU1 814 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 DENND6AQ8IWF6 608 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 KRT222Q8N1A0 295 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 MMGT1Q8N4V1 131 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 CERS2Q96G23 380 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 SEMA6CQ9H3T2 930 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 KIR3DX1Q9H7L2 352 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 GRHL1Q9NZI5 618 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 FBXO5Q9UKT4 447 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 SATB2Q9UPW6 733 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 COMMD10Q9Y6G5 202 aa19.99■□□□□ 0.79
VARS-224ENST00000479051 COL27A1Q8IZC6 1860 aaPredicted RBP19.99■□□□□ 0.79
VARS-224ENST00000479051 PRAMEF33A0A0G2JMD5 474 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 IGHV5-10-1A0A0J9YXX1 117 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 HGSO14964 777 aaPredicted RBP19.98■□□□□ 0.79
VARS-224ENST00000479051 KDM1AO60341 852 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 S1PR4O95977 384 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 ERVK-10P10266 1014 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 PKMP14618 531 aaKnown RBP19.98■□□□□ 0.79
VARS-224ENST00000479051 HOXB3P14651 431 aaPredicted RBP19.98■□□□□ 0.79
VARS-224ENST00000479051 CHRM3P20309 590 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 AOAHP28039 575 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 CAPZBP47756 277 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 PLTPP55058 493 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 CSE1LP55060 971 aaKnown RBP19.98■□□□□ 0.79
VARS-224ENST00000479051 CBLBQ13191 982 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 CTSL3PQ5NE16 218 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 STEAP4Q687X5 459 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 NAPRTQ6XQN6 538 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 UNC5AQ6ZN44 842 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 TMPRSS9Q7Z410 1059 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 ZBED8Q8IZ13 594 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 FBXO39Q8N4B4 442 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 FBXO36Q8NEA4 188 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 ACVR1CQ8NER5 493 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 LKAAEAR1Q8TD35 194 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 PYROXD1Q8WU10 500 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 ART4Q93070 314 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 CCDC74BQ96LY2 380 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 BIRC8Q96P09 236 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 LRRC1Q9BTT6 524 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 TRIT1Q9H3H1 467 aaKnown RBP19.98■□□□□ 0.79
VARS-224ENST00000479051 FBXO6Q9NRD1 293 aaPredicted RBP19.98■□□□□ 0.79
VARS-224ENST00000479051 SLC24A2Q9UI40 661 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 ASF1AQ9Y294 204 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 PCDHGA8Q9Y5G5 932 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 SPEGQ15772 3267 aa19.98■□□□□ 0.79
VARS-224ENST00000479051 RPN2P04844 631 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 MPOP05164 745 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 JMJD7P0C870 316 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 THRAP10827 490 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 RBMS1P29558 406 aaKnown RBP19.97■□□□□ 0.79
VARS-224ENST00000479051 SLC7A5Q01650 507 aa19.97■□□□□ 0.79
VARS-224ENST00000479051 CFHR1Q03591 330 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms