RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RPL3P39023 403 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 AMTP48728 403 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 MXI1P50539 228 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 SUOXP51687 545 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 CSNK2A1P68400 391 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 SPOCK1Q08629 439 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 AIMP1Q12904 312 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 CDC16Q13042 620 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 DECR1Q16698 335 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 KYNUQ16719 465 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMEM198Q66K66 360 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 SDCCAG8Q86SQ7 713 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZC3HC1Q86WB0 502 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 FOXRED2Q8IWF2 684 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 DSELQ8IZU8 1212 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 NEXN-AS1Q8NBZ9 246 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 CSNK2A3Q8NEV1 391 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 DUSP19Q8WTR2 217 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 PTPMT1Q8WUK0 201 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMCO6Q96DC7 493 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 IGSF21Q96ID5 467 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 NUDCD1Q96RS6 583 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 PAFAH2Q99487 392 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 APOL6Q9BWW8 343 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 AP1M1Q9BXS5 423 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMEM39BQ9GZU3 492 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 C17orf75Q9HAS0 396 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 CNGB3Q9NQW8 809 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 SLC9A2Q9UBY0 812 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 AGO1Q9UL18 857 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 PLAGL1Q9UM63 463 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 WBP11Q9Y2W2 641 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMEM184BQ9Y519 407 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 BRCA1P38398 1863 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 TJP1Q07157 1748 aa3.98□□□□□ -1.77
CDC42BPA-212ENST00000478573 A0A0B4J293 547 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMEM8BA6NDV4 472 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GOLGA6L9A6NEM1 432 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 H7C0S8 307 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 BUB3O43684 328 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 NDUFS7O75251 213 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GAGE7O76087 117 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GAGE12FP0CL80 117 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GAGE12GP0CL81 117 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GAGE12IP0CL82 117 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 PRLRP16471 622 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 STX2P32856 288 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 MSH2P43246 934 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 ECT2LQ008S8 904 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 POU3F1Q03052 451 aaPredicted RBP3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GRSF1Q12849 480 aaKnown RBP eCLIP3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GAGE1Q13065 139 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 GAGE4Q13068 117 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 MAD2L1Q13257 205 aaPredicted RBP3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 KIF19Q2TAC6 998 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 ERMARDQ5T6L9 678 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 FAM69BQ5VUD6 431 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 ADALQ6DHV7 355 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 KCTD18Q6PI47 426 aaPredicted RBP3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 BEST3Q8N1M1 668 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 POGLUT1Q8NBL1 392 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 OR1J2Q8NGS2 313 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 FAM216AQ8WUB2 273 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 TMEM255BQ8WV15 326 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 APBB2Q92870 758 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 TAAR8Q969N4 342 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 DGAT2Q96PD7 388 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 DUX5Q96PT3 197 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 KLHL4Q9C0H6 718 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 TRMT1Q9NXH9 659 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 TAB2Q9NYJ8 693 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 STK39Q9UEW8 545 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 TINAGQ9UJW2 476 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 ANAPC2Q9UJX6 822 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 FLT4P35916 1363 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 BCORQ6W2J9 1755 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 DLEC1Q9Y238 1755 aa3.97□□□□□ -1.77
CDC42BPA-212ENST00000478573 ATXN2Q99700 1313 aaKnown RBP3.96□□□□□ -1.77
CDC42BPA-212ENST00000478573 MEGF6O75095 1541 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 GPR75-ASB3A0A0A6YYF3 556 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 hCG_1809904A0A1W2PP81 198 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 A0A1W2PPE2 198 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 A0A1W2PR64 198 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 TCRBV21S2A2A0A5A6 115 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 H3BQ06 376 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 SPINT2O43291 252 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 SERPINI2O75830 405 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 CH25HO95992 272 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 EGFP01133 1207 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 APOBEC1P41238 236 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 LIG4P49917 911 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 ARSEP51690 589 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 HNRNPH2P55795 449 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 DLX5P56178 289 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 POU5F1Q01860 360 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 TRAF3Q13114 568 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 PRPF4BQ13523 1007 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 AMZ1Q400G9 498 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms