RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PLA2G3Q9NZ20 509 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 PKD2L2Q9NZM6 624 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 IFT80Q9P2H3 777 aaPredicted RBP7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 NDOR1Q9UHB4 597 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 SLC24A2Q9UI40 661 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 ST6GALNAC2Q9UJ37 374 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 POMT2Q9UKY4 750 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 FHOD1Q9Y613 1164 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 HS3ST3B1Q9Y662 390 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 AP1M2Q9Y6Q5 423 aa7.08□□□□□ -1.28
SPTLC1-205ENST00000477888 DYTNA2CJ06 578 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 FOXO6A8MYZ6 492 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 EIF3CLB5ME19 914 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 HAX1O00165 279 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 ADAM10O14672 748 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 DAPK3O43293 454 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 HCRTR1O43613 425 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 PRAMEF2O60811 474 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 RASAL1O95294 804 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 MTHFD1P11586 935 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 ST6GAL1P15907 406 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 VCLP18206 1134 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 POLR2CP19387 275 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 UGT1A4P22310 534 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 PRDX3P30048 256 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 MMP13P45452 471 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 HCAR3P49019 387 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 LMAN1P49257 510 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 MEOX1P50221 254 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 EPHB1P54762 984 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 RPL26P61254 145 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 RPL7AP62424 266 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 DPYSQ14117 519 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 SLC9A5Q14940 896 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 NKAIN1Q4KMZ8 207 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 ANKRD20A8PQ5CZ79 823 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNF569Q5MCW4 686 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 MARC1Q5VT66 337 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 CES4AQ5XG92 561 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 FAM83HQ6ZRV2 1179 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 DMRTC2Q8IXT2 367 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 GPR135Q8IZ08 494 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 FMR1NBQ8N0W7 255 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 BBS5Q8N3I7 341 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 TEX26Q8N6G2 289 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 DNAAF3Q8N9W5 541 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 C3orf20Q8ND61 904 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 GPR26Q8NDV2 337 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 THAP3Q8WTV1 239 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 CA5BP1Q8WTZ4 195 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 PHF10Q8WUB8 498 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 C18orf12Q96KH6 178 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 INSM2Q96T92 566 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 EIF3CQ99613 913 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNF559Q9BR84 538 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 CNPY3Q9BT09 278 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 ZSCAN5AQ9BUG6 496 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 NUP85Q9BW27 656 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 SPATA16Q9BXB7 569 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 NAA15Q9BXJ9 866 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 TDRD1Q9BXT4 1180 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 SPRTNQ9H040 489 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 KIR3DX1Q9H7L2 352 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 DHCR7Q9UBM7 475 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 KCNN3Q9UGI6 736 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 CDC23Q9UJX2 597 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 NOCTQ9UK39 431 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 TMPRSS11EQ9UL52 423 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 PSMD13Q9UNM6 376 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 RPL26L1Q9UNX3 145 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 AP4E1Q9UPM8 1137 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 CHKBQ9Y259 395 aa7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 CFAP20Q9Y6A4 193 aaKnown RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 NCOA6Q14686 2063 aaPredicted RBP7.07□□□□□ -1.28
SPTLC1-205ENST00000477888 SPTBP11277 2137 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 C17orf113A0A1B0GUU1 675 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CFAP99D6REC4 459 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 C3orf80F5H4A9 247 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 PROM1O43490 865 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 POP7O75817 140 aaKnown RBP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 OR2B3O76000 313 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 SLCO2B1O94956 709 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ZRANB2O95218 330 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ONECUT2O95948 504 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 HEXAP06865 529 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 INHBBP09529 407 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CHRNB2P17787 502 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 GABRA4P48169 554 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 DCDC1P59894 354 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 FMO1Q01740 532 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CDR2Q01850 454 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 TFF3Q07654 80 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 TMEM115Q12893 351 aaPredicted RBP7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 CAMK4Q16566 473 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ERMARDQ5T6L9 678 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 ALS2CLQ60I27 953 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 METRNLQ641Q3 311 aa7.06□□□□□ -1.28
SPTLC1-205ENST00000477888 PDPK2PQ6A1A2 396 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms