RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 AGERQ15109 404 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 RPS6KA2Q15349 733 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 PROX2Q3B8N5 592 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 GGTA1PQ4G0N0 100 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 XKR7Q5GH72 579 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 TCEAL5Q5H9L2 206 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 PRR23BQ6ZRT6 265 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 PARS2Q7L3T8 475 aaKnown RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 TRMT11Q7Z4G4 463 aaKnown RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 MILR1Q7Z6M3 343 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SNX32Q86XE0 403 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 RASGRP3Q8IV61 690 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 DDIASQ8IXT1 998 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 FBXW8Q8N3Y1 598 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 FBXO15Q8NCQ5 510 aaPredicted RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 CXorf40AQ8TE69 158 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SORCS1Q8WY21 1168 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 ZDHHC16Q969W1 377 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 NXPE3Q969Y0 559 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 ATP6V1E2Q96A05 226 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 TMEM159Q96B96 161 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 FAM136AQ96C01 138 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 RHBDF1Q96CC6 855 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 TUBGCP3Q96CW5 907 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 LINC00615Q96LM1 132 aaPredicted RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 PPP3R2Q96LZ3 170 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 FAM161BQ96MY7 647 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 CATSPER2Q96P56 530 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 EGFL8Q99944 293 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 CCM2Q9BSQ5 444 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 RIOK2Q9BVS4 552 aaKnown RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 SHCBP1LQ9BZQ2 653 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 ABCG8Q9H221 673 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 IGFLR1Q9H665 355 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 AKTIPQ9H8T0 292 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 CERS4Q9HA82 394 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SEMA4BQ9NPR2 832 aaPredicted RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 SDR39U1Q9NRG7 319 aaPredicted RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 EPS15L1Q9UBC2 864 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 POLG2Q9UHN1 485 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 EIF2B4Q9UI10 523 aaKnown RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 ANGPTL2Q9UKU9 493 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SARDHQ9UL12 918 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SCML1Q9UN30 329 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 GPR34Q9UPC5 381 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 MTF2Q9Y483 593 aaPredicted RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 TMEM265A0A087WTH1 108 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 A0A088AWK7 358 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 LOC100653049A0A140TA62 436 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 SERTM1A2A2V5 107 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 NCF1BA6NI72 391 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 NCF1CA8MVU1 366 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 A8MX80 341 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 TMEM233B4DJY2 109 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 NPIPB8E9PQR5 432 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 RGS14O43566 566 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 LZTS3O60299 673 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 KCNJ13O60928 360 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 PEX11AO75192 247 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 KRT34O76011 436 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 KRT6AP02538 564 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 KRT6BP04259 564 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 JUNP05412 331 aaKnown RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 HGFP14210 728 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 NCF1P14598 390 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 ACPPP15309 386 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ITGAXP20702 1163 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 C5AR1P21730 350 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 HMOX2P30519 316 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ETV3P41162 512 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 CPA2P48052 419 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 KRT6CP48668 564 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 NUDT2P50583 147 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 PNLIPRP1P54315 467 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 AP2B1P63010 937 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 EMX2Q04743 252 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 PCDH1Q08174 1060 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 TBL3Q12788 808 aaKnown RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 TMEM115Q12893 351 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 RPA4Q13156 261 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 CAMK2GQ13555 558 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 MMEL1Q495T6 779 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 SYTL3Q4VX76 610 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ATP6AP1LQ52LC2 224 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 PDCD4Q53EL6 469 aaKnown RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 C1orf146Q5VVC0 180 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 CLEC6AQ6EIG7 209 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 SDE2Q6IQ49 451 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ZFP1Q6P2D0 407 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 BNC2Q6ZN30 1099 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 UBE2R2Q712K3 238 aaPredicted RBP7.78□□□□□ -1.16
VMA21-203ENST00000477649 GOLGA7Q7Z5G4 137 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 ADGRG6Q86SQ4 1221 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 SYVN1Q86TM6 617 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 KLHDC8AQ8IYD2 350 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 DEFB107AQ8IZN7 70 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 DSELQ8IZU8 1212 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 PHC3Q8NDX5 983 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 METTL6Q8TCB7 284 aa7.78□□□□□ -1.16
VMA21-203ENST00000477649 LKAAEAR1Q8TD35 194 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms