RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CNTN1Q12860 1018 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ITGADQ13349 1161 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 TP53BP2Q13625 1128 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 TRIM60Q495X7 471 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 LRRC66Q68CR7 880 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 Q6ZVL8 140 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SNX20Q7Z614 316 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 CHPFQ8IZ52 775 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF540Q8NDQ6 660 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 OR2AP1Q8NGE2 309 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 MYLIPQ8WY64 445 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 CLP1Q92989 425 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 FBXL20Q96IG2 436 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 PLEKHG4BQ96PX9 1271 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SUV39H2Q9H5I1 410 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SSC5DA1L4H1 1573 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ARID1BQ8NFD5 2236 aaPredicted RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 LDB2O43679 373 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 KDM1AO60341 852 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ERAL1O75616 437 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 LAG3P18627 525 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ALDH4A1P30038 563 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SLC6A4P31645 630 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 PPM1AP35813 382 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 HTR6P50406 440 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 TMC5Q6UXY8 1006 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 GOLGA7Q7Z5G4 137 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 TMEM173Q86WV6 379 aaPredicted RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 BEND7Q8N7W2 519 aaPredicted RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SORCS1Q8WY21 1168 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 IGSF21Q96ID5 467 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ITCHQ96J02 903 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ZCCHC2Q9C0B9 1178 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 DERL2Q9GZP9 239 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 C6orf62Q9GZU0 229 aaPredicted RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 CXorf21Q9HAI6 301 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 C1orf109Q9NX04 203 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 WNT6Q9Y6F9 365 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 DOCK5Q9H7D0 1870 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 A0A1W2PP18 115 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 HHLA1C9JL84 531 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 GRM6O15303 877 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 PRKD3O94806 890 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 H6PDO95479 791 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 POP4O95707 220 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 ARRB2P32121 409 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 DNAJB13P59910 316 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 RPS14P62263 151 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 NFKB2Q00653 900 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 PTCHD3Q3KNS1 767 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 SLC15A3Q8IY34 581 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 APCDD1Q8J025 514 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 PLEKHA8Q96JA3 519 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 CGREF1Q99674 301 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 TDRD1Q9BXT4 1180 aaKnown RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 NLE1Q9NVX2 485 aaPredicted RBP10.84□□□□□ -0.67
COL27A1-204ENST00000477421 DUSP12Q9UNI6 340 aa10.84□□□□□ -0.67
COL27A1-204ENST00000477421 KIAA1217Q5T5P2 1943 aa10.83□□□□□ -0.67
COL27A1-204ENST00000477421 NUP214P35658 2090 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 TRBV23OR9-2A0A075B6M9 112 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 A0A0G2JN53 185 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ITGBL1O95965 494 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ANXA4P09525 319 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 POU2F1P14859 743 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 KCNC1P48547 511 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 TRPC1P48995 793 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 PRKCQQ04759 706 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 BROXQ5VW32 411 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 DENND5AQ6IQ26 1287 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 CHSY3Q70JA7 882 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 TRIM74Q86UV6 250 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ACDQ96AP0 544 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ASCC3Q8N3C0 2202 aaKnown RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 GPIP06744 558 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 THRBP10828 461 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ARCN1P48444 511 aaKnown RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 DGKEP52429 567 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 C21orf59P57076 290 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 MERTKQ12866 999 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 SEMA3BQ13214 749 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 RFTN1Q14699 578 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ZNF423Q2M1K9 1284 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ARSIQ5FYB1 569 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 ZNF648Q5T619 568 aaPredicted RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 CES4AQ5XG92 561 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 SULT1C3Q6IMI6 304 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 TMEM220Q6QAJ8 160 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 TSPAN33Q86UF1 283 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 HID1Q8IV36 788 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 SUCOQ9UBS9 1254 aaKnown RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 FAM234BA2RU67 622 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 FPGTO14772 594 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 PER2O15055 1255 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 SLC22A2O15244 555 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 SMAD6O43541 496 aaKnown RBP10.83□□□□□ -0.68
COL27A1-204ENST00000477421 SERPINA1P01009 418 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 CAPN3P20807 821 aa10.83□□□□□ -0.68
COL27A1-204ENST00000477421 HPCAL1P37235 193 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms