RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TRAF1Q13077 416 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 OASLQ15646 514 aaKnown RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 CDO1Q16878 200 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 FUT11Q495W5 492 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ANKRD20A4Q4UJ75 823 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ASPRV1Q53RT3 343 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ANKRD20A8PQ5CZ79 823 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 GLRA4Q5JXX5 417 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ANKRD20A2Q5SQ80 823 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ANKRD20A1Q5TYW2 823 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ANKRD20A3Q5VUR7 823 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 PRR27Q6MZM9 219 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 OTOAQ7RTW8 1153 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 FJX1Q86VR8 437 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 TUSC5Q8IXB3 177 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 CCDC107Q8WV48 283 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 CORO2AQ92828 525 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 RHBDF1Q96CC6 855 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ZBTB40Q9NUA8 1239 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 TBC1D7Q9P0N9 293 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 ITGA11Q9UKX5 1188 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 PADI2Q9Y2J8 665 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 PTGDR2Q9Y5Y4 395 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 NFS1Q9Y697 457 aa4.11□□□□□ -1.75
BRCA1-212ENST00000473961 WRNQ14191 1432 aaPredicted RBP eCLIP4.11□□□□□ -1.75
BRCA1-212ENST00000473961 LY6G6EA0A0G2JKS1 128 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ELOVL7A1L3X0 281 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 OR2M5A3KFT3 312 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 H3BNX3 289 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 DNM1LO00429 736 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 CLIC2O15247 247 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 FMO6PO60774 539 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 BMP10O95393 424 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 GLUD1P00367 558 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 H1F0P07305 194 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 PRSS2P07478 247 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ZFYP08048 801 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 HOXC6P09630 235 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 THEGLP0DJG4 465 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 SAGP10523 405 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ZNF23P17027 643 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ADRA2CP18825 462 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ACAT1P24752 427 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 GLUD2P49448 558 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 SNU13P55769 128 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 STX1BP61266 288 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 SSBP2P81877 361 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 CRYZQ08257 329 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 TEFQ10587 303 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 NFE2L1Q14494 772 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 RRS1Q15050 365 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 RABEP1Q15276 862 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ZRANB3Q5FWF4 1079 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 XKR9Q5GH70 373 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 LRRC73Q5JTD7 316 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 FAM69BQ5VUD6 431 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 MFSD12Q6NUT3 480 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 TMPRSS11FQ6ZWK6 438 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ADHFE1Q8IWW8 467 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ARL10Q8N8L6 244 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ACVR1CQ8NER5 493 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 OR2AJ1Q8NGZ0 328 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 FIBINQ8TAL6 211 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 SLC38A5Q8WUX1 472 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 SMPDL3BQ92485 455 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 DNASE1L2Q92874 299 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 C3orf30Q96M34 536 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 MUS81Q96NY9 551 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 INTS14Q96SY0 518 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 FEVQ99581 238 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 OLFM1Q99784 485 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 NEURL2Q9BR09 285 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 UTP14AQ9BVJ6 771 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 GTPBP2Q9BX10 602 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 SEMA6AQ9H2E6 1030 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 LRMDAQ9H2I8 198 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 DPAGT1Q9H3H5 408 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 TBC1D17Q9HA65 648 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 TRPV4Q9HBA0 871 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 CHCHD3Q9NX63 227 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 COQ3Q9NZJ6 369 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 C1RLQ9NZP8 487 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 POLLQ9UGP5 575 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 ABT1Q9ULW3 272 aaKnown RBP4.1□□□□□ -1.75
BRCA1-212ENST00000473961 MYO6Q9UM54 1294 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 FRMD4BQ9Y2L6 1034 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 IGSF1Q8N6C5 1336 aa4.1□□□□□ -1.75
BRCA1-212ENST00000473961 A0A1B0GVT2 93 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 A0A1W2PP11 408 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 A0A1W2PPM1 405 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 LINC01553A4QN01 128 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 OR5K3A6NET4 321 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 INAFM1C9JVW0 142 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 DDX39AO00148 427 aaKnown RBP4.09□□□□□ -1.75
BRCA1-212ENST00000473961 PPEF2O14830 753 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 SLC30A4O14863 429 aa4.09□□□□□ -1.75
BRCA1-212ENST00000473961 GOSR1O95249 250 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms