RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PABPN1LA6NDY0 278 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 NPEPPSL1A6NEC2 478 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 WNT9AO14904 365 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ADAM23O75077 832 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ZNF623O75123 536 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 OR4F21O95013 312 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CCNDBP1O95273 360 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 KRT6AP02538 564 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 KRT6BP04259 564 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 RPL10P27635 214 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 HTR1BP28222 390 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 GNPDA1P46926 289 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 KRT6CP48668 564 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CLK1P49759 484 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 ZNF140P52738 457 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 ISL1P61371 349 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TEKQ02763 1124 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CDK5R2Q13319 367 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TUSC3Q13454 348 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 MEP1AQ16819 746 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TIMM50Q3ZCQ8 353 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CDKL4Q5MAI5 379 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 VARS2Q5ST30 1063 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 ATAD3BQ5T9A4 648 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 SLC16A12Q6ZSM3 486 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 USP43Q70EL4 1123 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TLK2Q86UE8 772 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 AKAP14Q86UN6 197 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CDYL2Q8N8U2 506 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 MYDGFQ969H8 173 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 SLC35B4Q969S0 331 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ZHX1-C8orf76Q96EF9 292 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 LINGO1Q96FE5 620 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 PYURFQ96I23 114 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 SUSD3Q96L08 255 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ZNF583Q96ND8 569 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 MBOAT4Q96T53 435 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 THG1LQ9NWX6 298 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 C1orf109Q9NX04 203 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 NPAP1Q9NZP6 1156 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 KIF17Q9P2E2 1029 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TRPS1Q9UHF7 1281 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 RAPGEFL1Q9UHV5 662 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 INTS6Q9UL03 887 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 MYLKQ15746 1914 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 E2F3O00716 465 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 STX7O15400 261 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 DPM1O60762 260 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 FAM20BO75063 409 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CREG1O75629 220 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 B3GAT3O94766 335 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 MED26O95402 600 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 SLC2A4P14672 509 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ACPPP15309 386 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 IL7RP16871 459 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 FPR1P21462 350 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 POLR2IP36954 125 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 DCTP40126 519 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 MAGEA11P43364 429 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ZFP36L2P47974 494 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 MAXP61244 160 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ELP6Q0PNE2 266 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 GTF2H2Q13888 395 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 SPCS2Q15005 226 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CTF1Q16619 201 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 RUNDC3AQ59EK9 446 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 MS4A13Q5J8X5 152 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 PIK3R6Q5UE93 754 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CAPN13Q6MZZ7 669 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 GTF2H2CQ6P1K8 395 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TBPL2Q6SJ96 375 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 DEFB132Q7Z7B7 95 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 C14orf80Q86SX3 495 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TSPYL5Q86VY4 417 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 RALGPS2Q86X27 583 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 PSMG2Q969U7 264 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 TXNDC15Q96J42 360 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 ZFP42Q96MM3 310 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 RPRD1AQ96P16 312 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 PKMYT1Q99640 499 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 FAM126AQ9BYI3 521 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.02□□□□□ -1.45
HERC4-209ENST00000473533 KCNH6Q9H252 994 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 DUSP21Q9H596 190 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 NOL6Q9H6R4 1146 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 TLR8Q9NR97 1041 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 INIPQ9NRY2 104 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 GMPR2Q9P2T1 348 aaKnown RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 CORO2BQ9UQ03 480 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 POLR3HQ9Y535 204 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 TIMM13Q9Y5L4 95 aaPredicted RBP6.02□□□□□ -1.45
HERC4-209ENST00000473533 GMPPBQ9Y5P6 360 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 CORINQ9Y5Q5 1042 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 V9GYQ6 96 aa6.02□□□□□ -1.45
HERC4-209ENST00000473533 A0A1W2PQH9 124 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ARL5CA6NH57 179 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TBKBP1A7MCY6 615 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 F5H5T6 163 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 J3KR12 359 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms