RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 PTRHD1Q6GMV3 140 aaKnown RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 PRMT9Q6P2P2 845 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 TPRG1Q6ZUI0 275 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 KIAA0907Q7Z7F0 614 aaPredicted RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 SLC15A3Q8IY34 581 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 CMTM8Q8IZV2 173 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 SFRP1Q8N474 314 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 MARVELD2Q8N4S9 558 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 PCYOX1LQ8NBM8 494 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 GPR26Q8NDV2 337 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 ADCY4Q8NFM4 1077 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 MICAL1Q8TDZ2 1067 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 NAT14Q8WUY8 206 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 ATP6V1E2Q96A05 226 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 ZUFSPQ96AP4 578 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 TMEM125Q96AQ2 219 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 SLC45A3Q96JT2 553 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 RPL10LQ96L21 214 aaKnown RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 GCNAQ96QF7 691 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 ACOX2Q99424 681 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 CORO1BQ9BR76 489 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 SLC39A3Q9BRY0 314 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 NOL11Q9H8H0 719 aaKnown RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 COPS7BQ9H9Q2 264 aaPredicted RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 RDH14Q9HBH5 336 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 SARS2Q9NP81 518 aaKnown RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 ASAH2Q9NR71 780 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 HEBP1Q9NRV9 189 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 CMTM6Q9NX76 183 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 DLGAP2Q9P1A6 1054 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 TMPRSS11EQ9UL52 423 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 PCDHA9Q9Y5H5 950 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 TNPO3Q9Y5L0 923 aaKnown RBP6.31□□□□□ -1.4
SPEN-204ENST00000471538 MYO15AQ9UKN7 3530 aa6.31□□□□□ -1.4
SPEN-204ENST00000471538 PLXNA2O75051 1894 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 C5orf42Q9H799 3197 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 SOBPA7XYQ1 873 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ZBBXA8MT70 800 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 HIDE1A8MVS5 230 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 C9JVG2 144 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 EIF3FO00303 357 aaPredicted RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 ANKRD28O15084 1053 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 LSM1O15116 133 aaKnown RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 GRM6O15303 877 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 RAD51BO15315 384 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 DNAJA2O60884 412 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 CRCPO75575 148 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ARHGEF15O94989 841 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 CHEK2O96017 543 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 CAPN1P07384 714 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 UBTFL6P0CB48 400 aaPredicted RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 TCF3P15923 654 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ZNF26P17031 533 aaPredicted RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 ITGB6P18564 788 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ATP6V1B2P21281 511 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 DGKAP23743 735 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 SLC7A1P30825 629 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 NSG1P42857 185 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 RGS4P49798 205 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 CCNHP51946 323 aaPredicted RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 ATXN3P54252 364 aaPredicted RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 NME5P56597 212 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 UFM1P61960 85 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 EMX2Q04743 252 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 GTF2H2Q13888 395 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 KIAA0040Q15053 153 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ZNF77Q15935 545 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 PHKG1Q16816 387 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 GRAMD1BQ3KR37 738 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 CARD16Q5EG05 197 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 PAGE3Q5JUK9 113 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 TMEM31Q5JXX7 168 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 PRSS36Q5K4E3 855 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 RARS2Q5T160 578 aaKnown RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 LRRC66Q68CR7 880 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 CAPRIN2Q6IMN6 1127 aaKnown RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 LCN8Q6JVE9 175 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 HMBOX1Q6NT76 420 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 GTF2H2CQ6P1K8 395 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 METTL2BQ6P1Q9 378 aaKnown RBP6.3□□□□□ -1.4
SPEN-204ENST00000471538 SCIMPQ6UWF3 145 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 UGT2A3Q6UWM9 527 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 LAYNQ6UX15 382 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 DPY19L3Q6ZPD9 716 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 RFLNAQ6ZTI6 216 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 FRA10AC1Q70Z53 315 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 RTL10Q7L3V2 364 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 OTOP2Q7RTS6 562 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ADIPOR2Q86V24 386 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 SPATA24Q86W54 205 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ZFAND4Q86XD8 727 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 TMEM25Q86YD3 366 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 RASGRP3Q8IV61 690 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 MYO1HQ8N1T3 1032 aa6.3□□□□□ -1.4
SPEN-204ENST00000471538 ELMOD1Q8N336 334 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms