RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 INSM2Q96T92 566 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 BARD1Q99728 777 aaKnown RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 C17orf62Q9BQA9 187 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 DPH2Q9BQC3 489 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-204ENST00000471488 NDC1Q9BTX1 674 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 DHRS4Q9BTZ2 278 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 SRMSQ9H3Y6 488 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 SLC6A20Q9NP91 592 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 RAD18Q9NS91 495 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 PLA2G3Q9NZ20 509 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 SLC24A2Q9UI40 661 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF711Q9Y462 761 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 CCDC168Q8NDH2 2452 aa6.67□□□□□ -1.34
HDAC1-204ENST00000471488 SVILO95425 2214 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 TACC2O95359 2948 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 TCRBV5S1A1TA0A578 114 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 DYTNA2CJ06 578 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 FAM227AF5H4B4 570 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 KCNK1O00180 336 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 MATN3O15232 486 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 GPR39O43194 453 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 BUD23O43709 281 aaKnown RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UGT1A9O60656 530 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 KLF7O75840 302 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UGT1A6P19224 532 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 CAPN3P20807 821 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UGT1A1P22309 533 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UGT1A4P22310 534 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 CES1P23141 567 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 IL1R2P27930 398 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 PRDX3P30048 256 aaKnown RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 PBX1P40424 430 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF135P52742 658 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SMSP52788 366 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 CTSCP53634 463 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 JAM2P57087 298 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 PPP2R2AP63151 447 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 TMPRSS15P98073 1019 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 IHHQ14623 411 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 RBBP7Q16576 425 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 TCP11X2Q5H9J9 407 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 FCRL6Q6DN72 434 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SMYD5Q6GMV2 418 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 FAM151BQ6UXP7 276 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 WASH2PQ6VEQ5 465 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 RPTNQ6XPR3 784 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 MEX3BQ6ZN04 569 aaKnown RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 CDHR3Q6ZTQ4 885 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 TAOK1Q7L7X3 1001 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 TRIM73Q86UV7 250 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 TMEM200AQ86VY9 491 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 PRSS58Q8IYP2 241 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 METTL27Q8N6F8 245 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 RASGEF1AQ8N9B8 481 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 OR2Y1Q8NGV0 311 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 RELTQ969Z4 430 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 EID2BQ96D98 161 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 HDAC11Q96DB2 347 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 RBM41Q96IZ5 413 aaKnown RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 NRTNQ99748 197 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SLX1AQ9BQ83 275 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 LHPPQ9H008 270 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SPRTNQ9H040 489 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 XKR8Q9H6D3 395 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SOX17Q9H6I2 414 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UGT1A7Q9HAW7 530 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UGT1A10Q9HAW8 530 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UGT1A8Q9HAW9 530 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 PCDH18Q9HCL0 1135 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 C1GALT1Q9NS00 363 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SEMA3GQ9NS98 782 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 UBP1Q9NZI7 540 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SEMA5BQ9P283 1151 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 PTGFRNQ9P2B2 879 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 SEC14L3Q9UDX4 400 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 COLEC10Q9Y6Z7 277 aa6.66□□□□□ -1.34
HDAC1-204ENST00000471488 FER1L5A0AVI2 2057 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 MYO7BQ6PIF6 2116 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 ZGRF1Q86YA3 2104 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TMEM191CA6NGB0 347 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 BTN3A1O00481 513 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 PMPCBO75439 489 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 UMODP07911 640 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 CD63P08962 238 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 CD48P09326 243 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 RARAP10276 462 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 MSH3P20585 1137 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TNNT3P45378 269 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 RPL26P61254 145 aaKnown RBP6.65□□□□□ -1.34
HDAC1-204ENST00000471488 PRKG2Q13237 762 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TESK1Q15569 626 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 DPYSL2Q16555 572 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 DPCR1Q3MIW9 517 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 TUBB8Q3ZCM7 444 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 NKAIN1Q4KMZ8 207 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 ZNF789Q5FWF6 425 aa6.65□□□□□ -1.34
HDAC1-204ENST00000471488 B3GNTL1Q67FW5 361 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms