RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 IZUMO3Q5VZ72 239 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 CES4AQ5XG92 561 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 KAZNQ674X7 775 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 RAET1GQ6H3X3 334 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 DPPA4Q7L190 304 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 BZW1Q7L1Q6 419 aaKnown RBP5.72□□□□□ -1.49
VARS-222ENST00000470953 CAMKMTQ7Z624 323 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 DAAM2Q86T65 1068 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 CPNE8Q86YQ8 564 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 TMTC1Q8IUR5 882 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 CCDC170Q8IYT3 715 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 GALNT16Q8N428 558 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 SPC24Q8NBT2 197 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 MCUQ8NE86 351 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 LPCAT1Q8NF37 534 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 HCAR2Q8TDS4 363 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 MR1Q95460 341 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 RNF25Q96BH1 459 aaPredicted RBP5.72□□□□□ -1.49
VARS-222ENST00000470953 MRFAP1L1Q96HT8 127 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 RBM41Q96IZ5 413 aaKnown RBP5.72□□□□□ -1.49
VARS-222ENST00000470953 TGM7Q96PF1 710 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 POLDIP3Q9BY77 421 aaKnown RBP5.72□□□□□ -1.49
VARS-222ENST00000470953 RBSNQ9H1K0 784 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 YY1AP1Q9H869 796 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 RBM22Q9NW64 420 aaKnown RBP eCLIP5.72□□□□□ -1.49
VARS-222ENST00000470953 LRFN1Q9P244 771 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 ARMCX1Q9P291 453 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 B4GALT6Q9UBX8 382 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 TCFL5Q9UL49 500 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 DNPEPQ9ULA0 475 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 NENFQ9UMX5 172 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 SNX7Q9UNH6 387 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 SLC17A4Q9Y2C5 497 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 HYOU1Q9Y4L1 999 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 SLC30A1Q9Y6M5 507 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 GTF3C1Q12789 2109 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 KCNK1O00180 336 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 PDE2AO00408 941 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 MAFKO60675 156 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 MTA2O94776 668 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 STK10O94804 968 aaKnown RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 ATE1O95260 518 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 PGLSO95336 258 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 HLA-DQB2P05538 268 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 CTPS1P17812 591 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 CES1P23141 567 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 KDELR1P24390 212 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 TSFMP43897 325 aaKnown RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 TERF1P54274 439 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 FOXL2P58012 376 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 PPP1CAP62136 330 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 DSC2Q02487 901 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 NSUN2Q08J23 767 aaKnown RBP eCLIP5.71□□□□□ -1.5
VARS-222ENST00000470953 TRAF2Q12933 501 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 CDC16Q13042 620 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 TBX2Q13207 712 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 PAFAH1B3Q15102 231 aaKnown RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 PCSK7Q16549 785 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 ASTE1Q2TB18 679 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 ATP13A4Q4VNC1 1196 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 LRRC38Q5VT99 294 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 CCDC70Q6NSX1 233 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 C11orf63Q6NUN7 778 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 DOK6Q6PKX4 331 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 GFRALQ6UXV0 394 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 LIPIQ6XZB0 460 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 PLXDC1Q8IUK5 500 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 TC2NQ8N9U0 490 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 DNAJB14Q8TBM8 379 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 ADAMTS18Q8TE60 1221 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 KLHL6Q8WZ60 621 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 RAPGEF5Q92565 580 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 NACC2Q96BF6 587 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 HAUS1Q96CS2 278 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 SGSM3Q96HU1 749 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 PANX2Q96RD6 677 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 TAAR6Q96RI8 345 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 BAG1Q99933 345 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 WDR77Q9BQA1 342 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 TEX101Q9BY14 249 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 ADGRE3Q9BY15 652 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 NOD2Q9HC29 1040 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 NPDC1Q9NQX5 325 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 PHPT1Q9NRX4 125 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 OLAHQ9NV23 265 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 KLHL8Q9P2G9 620 aaPredicted RBP5.71□□□□□ -1.5
VARS-222ENST00000470953 TBC1D29Q9UFV1 150 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 TMEM98Q9Y2Y6 226 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 PRKAB1Q9Y478 270 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 PCDHA13Q9Y5I0 950 aa5.71□□□□□ -1.5
VARS-222ENST00000470953 TENM1Q9UKZ4 2725 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 DYSFO75923 2080 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 C1orf232A0A0U1RR37 186 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 NPIPB15A6NHN6 443 aaPredicted RBP5.7□□□□□ -1.5
VARS-222ENST00000470953 FOXO6A8MYZ6 492 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 ZNF487B1APH4 448 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 H7C0C1 242 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 MATN3O15232 486 aa5.7□□□□□ -1.5
VARS-222ENST00000470953 CST8O60676 142 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms