RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 NFKBIAP25963 317 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 LIPAP38571 399 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 CETN2P41208 172 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 CDH4P55283 916 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 TPI1P60174 286 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 MPP3Q13368 585 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 KRT81Q14533 505 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 SLC18A3Q16572 532 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ACCSLQ4AC99 568 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 MS4A13Q5J8X5 152 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 TEDDM1Q5T9Z0 273 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 SYPL2Q5VXT5 272 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 SLC9A4Q6AI14 798 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 RETSATQ6NUM9 610 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 MZT2AQ6P582 158 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 RFWD3Q6PCD5 774 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 SLC36A4Q6YBV0 504 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 MON1BQ7L1V2 547 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 APTXQ7Z2E3 356 aaKnown RBP6.31□□□□□ -1.4
PTCD3-208ENST00000469585 IRF2BP2Q7Z5L9 587 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 RABEPKQ7Z6M1 372 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 KIAA1328Q86T90 577 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 SETD3Q86TU7 594 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-208ENST00000469585 LONP2Q86WA8 852 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 FAM131BQ86XD5 332 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 CCDC170Q8IYT3 715 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 BBS5Q8N3I7 341 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 NEU4Q8WWR8 484 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-208ENST00000469585 PRCCQ92733 491 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-208ENST00000469585 TBC1D31Q96DN5 1066 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 CHFRQ96EP1 664 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ZDHHC12Q96GR4 267 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ZNF830Q96NB3 372 aaPredicted RBP6.31□□□□□ -1.4
PTCD3-208ENST00000469585 LRRC3BQ96PB8 259 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 FERMT1Q9BQL6 677 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ZYG11BQ9C0D3 744 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 HSD3B7Q9H2F3 369 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 GLOD4Q9HC38 313 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ZBTB26Q9HCK0 441 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 NECTIN3Q9NQS3 549 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ABHD10Q9NUJ1 306 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ABCB8Q9NUT2 735 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 EHD3Q9NZN3 535 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 UVRAGQ9P2Y5 699 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 OR12D3Q9UGF7 316 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 CYTH4Q9UIA0 394 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 VPS51Q9UID3 782 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 ANAPC7Q9UJX3 599 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 STOML2Q9UJZ1 356 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 VANGL2Q9ULK5 521 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 MMP17Q9ULZ9 603 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 HS3ST3A1Q9Y663 406 aa6.31□□□□□ -1.4
PTCD3-208ENST00000469585 CUL9Q8IWT3 2517 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 TCRBV21S2A2A0A5A6 115 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 FAM170AA1A519 330 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 A1L4Q6 167 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 ZSCAN5CA6NGD5 496 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 E9PAM4 449 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 AP5Z1O43299 807 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 TPD52L2O43399 206 aaKnown RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PI15O43692 258 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 CREB3O43889 395 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 RPP40O75818 363 aaKnown RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PAPSS2O95340 614 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 ADCY5O95622 1261 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 LMNAP02545 664 aaKnown RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 DNTTP04053 509 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SRPRAP08240 638 aaKnown RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 KRT7P08729 469 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 IL6RP08887 468 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 DLDP09622 509 aaKnown RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SP9P0CG40 484 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 EGR1P18146 543 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 RRM1P23921 792 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 HOXD9P28356 352 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PCSK6P29122 969 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 EPHA3P29320 983 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 EPHB2P29323 1055 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 OXTRP30559 389 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PRKAR1BP31321 381 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SERPINB6P35237 376 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 OPRD1P41143 372 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 TNNT3P45378 269 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 CXCR3P49682 368 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 CLCN2P51788 898 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 ECT2LQ008S8 904 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 RAD51Q06609 339 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 SIM2Q14190 667 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 TAF5Q15542 800 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 CFAP58Q5T655 872 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 FAM46CQ5VWP2 391 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 ANO7Q6IWH7 933 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 KIAA1324Q6UXG2 1013 aaKnown RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 DBX2Q6ZNG2 339 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 LPCAT2Q7L5N7 544 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 ZNF571Q7Z3V5 609 aaPredicted RBP6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PHLDB2Q86SQ0 1253 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 KRT73Q86Y46 540 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 TMTC1Q8IUR5 882 aa6.3□□□□□ -1.4
PTCD3-208ENST00000469585 PSTKQ8IV42 348 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms