RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 CCDC91Q7Z6B0 441 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 CROCCP2Q86T23 111 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 PDZD3Q86UT5 571 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 IQCKQ8N0W5 287 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 RIBC1Q8N443 379 aaPredicted RBP14.89□□□□□ -0.03
SNIP1-202ENST00000468040 AVL9Q8NBF6 648 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 ACVR1CQ8NER5 493 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 OR2W6PQ8NHA6 318 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 GIMAP7Q8NHV1 300 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 TMEM109Q9BVC6 243 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 WWP1Q9H0M0 922 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 OR52A5Q9H2C5 316 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 SYTL2Q9HCH5 934 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 NCKIPSDQ9NZQ3 722 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 GALPQ9UBC7 116 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 CDYLQ9Y232 598 aa14.89□□□□□ -0.03
SNIP1-202ENST00000468040 ZFC3H1O60293 1989 aaKnown RBP14.89□□□□□ -0.03
SNIP1-202ENST00000468040 HMX2A2RU54 273 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 C4orf47A7E2U8 309 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 ZNF37AP17032 561 aaPredicted RBP14.88□□□□□ -0.03
SNIP1-202ENST00000468040 CRABP2P29373 138 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 MAPK9P45984 424 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 SLCO1A2P46721 670 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 LIMK1P53667 647 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 IL2P60568 153 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 ACSBG2Q5FVE4 666 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 CAPRIN2Q6IMN6 1127 aaKnown RBP14.88□□□□□ -0.03
SNIP1-202ENST00000468040 IYDQ6PHW0 289 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 OGFOD3Q6PK18 319 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 PAQR3Q6TCH7 311 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 NEK10Q6ZWH5 1172 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 RAPH1Q70E73 1250 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 CPNE9Q8IYJ1 553 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 ARL10Q8N8L6 244 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 FAM181AQ8N9Y4 354 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 EPS8L3Q8TE67 593 aaKnown RBP14.88□□□□□ -0.03
SNIP1-202ENST00000468040 SLC30A3Q99726 388 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 CAB39LQ9H9S4 337 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 GPAMQ9HCL2 828 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 PSMD13Q9UNM6 376 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 WDR37Q9Y2I8 494 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 NFS1Q9Y697 457 aa14.88□□□□□ -0.03
SNIP1-202ENST00000468040 SMIM23A6NLE4 172 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 TRIM38O00635 465 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 EML2O95834 649 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 BRAFP15056 766 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 TYK2P29597 1187 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 PDHA2P29803 388 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 RPIAP49247 311 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 ZNF844Q08AG5 666 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 CASP8Q14790 479 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 TAF1BQ53T94 588 aaPredicted RBP14.87□□□□□ -0.03
SNIP1-202ENST00000468040 STPG1Q5TH74 334 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 LRIG3Q6UXM1 1119 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 VRK3Q8IV63 474 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 NAGSQ8N159 534 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 SFRP1Q8N474 314 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 NKAPQ8N5F7 415 aaKnown RBP14.87□□□□□ -0.03
SNIP1-202ENST00000468040 EID2Q8N6I1 236 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 MAPK15Q8TD08 544 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 SKA2Q8WVK7 121 aaPredicted RBP14.87□□□□□ -0.03
SNIP1-202ENST00000468040 ISL2Q96A47 359 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 RMDN2Q96LZ7 410 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 C12orf66Q96MD2 445 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 FOPNLQ96NB1 174 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 STN1Q9H668 368 aaKnown RBP14.87□□□□□ -0.03
SNIP1-202ENST00000468040 SNX15Q9NRS6 342 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 EVA1BQ9NVM1 165 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 SIRPGQ9P1W8 387 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 CTNNAL1Q9UBT7 734 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 TBK1Q9UHD2 729 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 TLK1Q9UKI8 766 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 HEBP2Q9Y5Z4 205 aa14.87□□□□□ -0.03
SNIP1-202ENST00000468040 A0A087X1B8 175 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 TLDC2A0PJX2 215 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 TRIM49D1C9J1S8 452 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 PHGDHO43175 533 aaKnown RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 SIGLEC6O43699 453 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 GDF9O60383 454 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 NOBOXO60393 691 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 WISP3O95389 354 aaPredicted RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 ALDOAP04075 364 aaKnown RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 RPN2P04844 631 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 MPC1LP0DKB6 136 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 MTHFD1P11586 935 aaKnown RBP14.86□□□□□ -0.03
SNIP1-202ENST00000468040 CD59P13987 128 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 ACADLP28330 430 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 SLC26A3P40879 764 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 ZNF460Q14592 562 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 CLCA4Q14CN2 919 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 RPE65Q16518 533 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 C14orf28Q4W4Y0 310 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 UNC5DQ6UXZ4 953 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 TIFABQ6ZNK6 161 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 HDXQ7Z353 690 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 CMC1Q7Z7K0 106 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 SLC9B2Q86UD5 537 aa14.86□□□□□ -0.03
SNIP1-202ENST00000468040 C17orf82Q86X59 251 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms