RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TROAPQ12815 778 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 RNASEH2BQ5TBB1 312 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 C16orf82Q7Z2V1 217 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 ZDHHC17Q8IUH5 632 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 ZNF595Q8IYB9 648 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 ZNF441Q8N8Z8 693 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 ZBTB8BQ8NAP8 495 aaPredicted RBP4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 OR2AJ1Q8NGZ0 328 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 MRPS27Q92552 414 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 LINC00615Q96LM1 132 aaPredicted RBP4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 TTC14Q96N46 770 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 ZNF582Q96NG8 517 aaPredicted RBP4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 GBP5Q96PP8 586 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 BTBD10Q9BSF8 475 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 FNDC11Q9BVV2 318 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 ANKRD2Q9GZV1 360 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 OPA3Q9H6K4 179 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 SLA2Q9H6Q3 261 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 DDX31Q9H8H2 851 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 ZWILCHQ9H900 591 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 MBNL1Q9NR56 388 aaKnown RBP4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 MIOSQ9NXC5 875 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 NPAP1Q9NZP6 1156 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 RHCGQ9UBD6 479 aa4.83□□□□□ -1.64
GAPVD1-211ENST00000467707 A0A0G2JNG1 304 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 FAM170AA1A519 330 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 CTAGE9A4FU28 777 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 ACOT8O14734 319 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 TOMM70O94826 608 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 PAPSS2O95340 614 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 TFAP2AP05549 437 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 RAB40ALP0C0E4 278 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 CTAGE8P0CG41 777 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 IFNAR1P17181 557 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 ACHEP22303 614 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 SLC6A6P31641 620 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 GP5P40197 560 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 HOXA1P49639 335 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 ASCL1P50553 236 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 MMP15P51511 669 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 KIR2DS5Q14953 304 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 DUOXA1Q1HG43 343 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 VWC2Q2TAL6 325 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 HECTD3Q5T447 861 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 ARMC3Q5W041 872 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 C9orf57Q5W0N0 161 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 ADCK2Q7Z695 626 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 LONP2Q86WA8 852 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 METTL23Q86XA0 190 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 PTOV1Q86YD1 416 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 CTAGE4Q8IX94 777 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 L3MBTL4Q8NA19 623 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 CAMKVQ8NCB2 501 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 NUDCD2Q8WVJ2 157 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 ROBO4Q8WZ75 1007 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 SEMA4DQ92854 862 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 OXNAD1Q96HP4 312 aaPredicted RBP4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 FER1L6-AS2Q96M78 137 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 SFXN2Q96NB2 322 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 IL17FQ96PD4 163 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 OLFM1Q99784 485 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 ADPGKQ9BRR6 497 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 WACQ9BTA9 647 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 DPAGT1Q9H3H5 408 aa4.82□□□□□ -1.64
GAPVD1-211ENST00000467707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.82□□□□□ -1.642e-7■□□□□ 9.2
GAPVD1-211ENST00000467707 PLSCR5A0PG75 271 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 DENND3A2RUS2 1198 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 SYNGR3O43761 229 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 PPP1R3DO95685 299 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 RPN1P04843 607 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 TCEA1P23193 301 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 PSMC4P43686 418 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 PDLIM4P50479 330 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 RBPJQ06330 500 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 PNRC1Q12796 327 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 SCARB2Q14108 478 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 GRTP1Q5TC63 336 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 NDUFAF5Q5TEU4 345 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 FAM171BQ6P995 826 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 PLXDC2Q6UX71 529 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 TMPRSS11FQ6ZWK6 438 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 RBM23Q86U06 439 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 EXOC3L1Q86VI1 746 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 NAGSQ8N159 534 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 METTL27Q8N6F8 245 aaPredicted RBP4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 IQUBQ8NA54 791 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 SETD6Q8TBK2 473 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 DAZLQ92904 295 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 FAM162AQ96A26 154 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 SPDL1Q96EA4 605 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 LINGO1Q96FE5 620 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 SIPA1Q96FS4 1042 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 RMDN2Q96LZ7 410 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 CSTL1Q9H114 145 aa4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 RALYQ9UKM9 306 aaKnown RBP4.81□□□□□ -1.64
GAPVD1-211ENST00000467707 A0A1W2PPM1 405 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 TMEM221A6NGB7 291 aa4.8□□□□□ -1.64
GAPVD1-211ENST00000467707 PTGESO14684 152 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms