RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	SRF	P11831	508 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	AOC1	P19801	751 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	PREP	P48147	710 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	RPIA	P49247	311 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	RASSF2	P50749	326 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	ADPRH	P54922	357 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	FOXA1	P55317	472 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	PKNOX1	P55347	436 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	RPS21	P63220	83 aa	Known RBP	12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	CDK3	Q00526	305 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	CDKL1	Q00532	357 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	GTF2H2	Q13888	395 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	AGER	Q15109	404 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	IRF4	Q15306	451 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	SMAD2	Q15796	467 aa	Known RBP	12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	WSCD2	Q2TBF2	565 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	FBXO43	Q4G163	708 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	CDKL4	Q5MAI5	379 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	EOGT	Q5NDL2	527 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	GTF2H2C	Q6P1K8	395 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	PNCK	Q6P2M8	343 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	CRTC3	Q6UUV7	619 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	GPRIN3	Q6ZVF9	776 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	TCAIM	Q8N3R3	496 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	OR14C36	Q8NHC7	312 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	FAM3C	Q92520	227 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	C19orf60	Q96EN9	201 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	COX14	Q96I36	57 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	LENG8	Q96PV6	779 aa	Predicted RBP	12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	KCNA7	Q96RP8	456 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	ZNF382	Q96SR6	550 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	SLC12A9	Q9BXP2	914 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	NUSAP1	Q9BXS6	441 aa	Known RBP	12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	TRIM54	Q9BYV2	358 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	PARVB	Q9HBI1	364 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	CD248	Q9HCU0	757 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	ARL15	Q9NXU5	204 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	TAGLN3	Q9UI15	199 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	SCML1	Q9UN30	329 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	ZFR2	Q9UPR6	939 aa	Known RBP	12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	PDE10A	Q9Y233	779 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	STK38L	Q9Y2H1	464 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435	DOCK9	Q9BZ29	2069 aa		12.05	□□□□□ -0.48
HDLBP-231	ENST00000467435		A0A1B0GTL3	188 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	SLC5A10	A0PJK1	596 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	LIN7A	O14910	233 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	DCX	O43602	365 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	CCNT2	O60583	730 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	RNGTT	O60942	597 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ESRRB	O95718	433 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	FOSL2	P15408	326 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	NQO1	P15559	274 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ZNF8	P17098	575 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	HIST1H2AD	P20671	130 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	TEAD1	P28347	426 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	PRDX3	P30048	256 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ARL1	P40616	181 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	CPA2	P48052	419 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	KCNJ2	P63252	427 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	FGL2	Q14314	439 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	PLA2G4E	Q3MJ16	856 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	UGT3A2	Q3SY77	523 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	DOK6	Q6PKX4	331 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	EFL1	Q7Z2Z2	1120 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	KBTBD6	Q86V97	674 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	SLC22A15	Q8IZD6	547 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	LILRA3	Q8N6C8	439 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	TEX9	Q8N6V9	391 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	OR52B6	Q8NGF0	335 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	CEP70	Q8NHQ1	597 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ACTRT2	Q8TDY3	377 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ASB11	Q8WXH4	323 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	HLA-C	Q95604	372 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	SIPA1	Q96FS4	1042 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ZNF514	Q96K75	400 aa	Predicted RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	HIST1H2AH	Q96KK5	128 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	CATSPER2	Q96P56	530 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	HIST1H2AJ	Q99878	128 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	H2AFJ	Q9BTM1	129 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	CD244	Q9BZW8	370 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ZNF385D	Q9H6B1	395 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	NOL11	Q9H8H0	719 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	PREB	Q9HCU5	417 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	SLC2A4RG	Q9NR83	387 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	OPTC	Q9UBM4	332 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	FZD4	Q9ULV1	537 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	G3BP2	Q9UN86	482 aa	Known RBP	12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	ANGPTL3	Q9Y5C1	460 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435	DNAJC15	Q9Y5T4	150 aa		12.04	□□□□□ -0.48
HDLBP-231	ENST00000467435		A0A1W2PQU0	124 aa		12.03	□□□□□ -0.48
HDLBP-231	ENST00000467435	SHISA7	A6NL88	538 aa		12.03	□□□□□ -0.48
HDLBP-231	ENST00000467435	GFY	I3L273	518 aa		12.03	□□□□□ -0.48
HDLBP-231	ENST00000467435		K7EPI3	171 aa		12.03	□□□□□ -0.48
HDLBP-231	ENST00000467435	OR7A17	O14581	309 aa		12.03	□□□□□ -0.48
HDLBP-231	ENST00000467435	PIP5K1B	O14986	540 aa		12.03	□□□□□ -0.48
HDLBP-231	ENST00000467435	OR4F21	O95013	312 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms