RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 HELZ2Q9BYK8 2649 aaKnown RBP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 GRID2IPA4D2P6 1211 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 C21orf140B9A014 251 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 E7EVH7 732 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 PSMD3O43242 534 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 KLK3P07288 261 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-206ENST00000466591 PRLHRP49683 370 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 TUBB4BP68371 445 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 TUBB2AQ13885 445 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 POU6F1Q14863 301 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 SKIDA1Q1XH10 827 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 CRTC2Q53ET0 693 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-206ENST00000466591 RAD9BQ6WBX8 426 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 DNAAF3Q8N9W5 541 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 ACVR1CQ8NER5 493 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 CT55Q8WUE5 264 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 ABHD17AQ96GS6 310 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 SLC41A2Q96JW4 573 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 DNAJC1Q96KC8 554 aaKnown RBP17.08■□□□□ 0.32
COL7A1-206ENST00000466591 LINC00615Q96LM1 132 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-206ENST00000466591 RMDN2Q96LZ7 410 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 FCRL4Q96PJ5 515 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 TTC1Q99614 292 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 GORASP1Q9BQQ3 440 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 TUBB2BQ9BVA1 445 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 LACRTQ9GZZ8 138 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 SMARCAL1Q9NZC9 954 aa17.08■□□□□ 0.32
COL7A1-206ENST00000466591 F8W8V4 182 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 TERTO14746 1132 aaKnown RBP17.07■□□□□ 0.32
COL7A1-206ENST00000466591 CREG1O75629 220 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 RFPL1O75677 317 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 FTCDO95954 541 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 TPH1P17752 444 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 F8A1P23610 371 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 ZNF140P52738 457 aaPredicted RBP17.07■□□□□ 0.32
COL7A1-206ENST00000466591 GPR19Q15760 415 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 SYTL3Q4VX76 610 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 SEL1L2Q5TEA6 688 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 PPP1R21Q6ZMI0 780 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 LINC00523Q86TU6 105 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 SERPINA9Q86WD7 417 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 TEX19Q8NA77 164 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 OR8K5Q8NH50 307 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 ALG3Q92685 438 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 CLIP3Q96DZ5 547 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 TLR10Q9BXR5 811 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 RBSNQ9H1K0 784 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 ACTL8Q9H568 366 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 COG4Q9H9E3 785 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 KCND1Q9NSA2 647 aa17.07■□□□□ 0.32
COL7A1-206ENST00000466591 PACSIN2Q9UNF0 486 aaPredicted RBP17.07■□□□□ 0.32
COL7A1-206ENST00000466591 CCDC78A2IDD5 438 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 ACRV1P26436 265 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 PREPP48147 710 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 XIAPP98170 497 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 CACNG1Q06432 222 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 CARFQ8N187 725 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 DESI2Q9BSY9 194 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 HGH1Q9BTY7 390 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 GPR87Q9BY21 358 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 PIH1D1Q9NWS0 290 aaKnown RBP17.06■□□□□ 0.32
COL7A1-206ENST00000466591 G3BP2Q9UN86 482 aaKnown RBP17.06■□□□□ 0.32
COL7A1-206ENST00000466591 CFAP46Q8IYW2 2715 aa17.06■□□□□ 0.32
COL7A1-206ENST00000466591 C17orf113A0A1B0GUU1 675 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 SLC9B1P1A6NJY1 282 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 QSOX1O00391 747 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 DDX3YO15523 660 aaKnown RBP17.05■□□□□ 0.32
COL7A1-206ENST00000466591 ARHGAP6O43182 974 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 TIAF1O95411 115 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 CYP2A7P20853 494 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 CERS6Q6ZMG9 384 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 D2HGDHQ8N465 521 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 LILRA3Q8N6C8 439 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-206ENST00000466591 LRRC57Q8N9N7 239 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 SPC24Q8NBT2 197 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 STYXQ8WUJ0 223 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 CPT1BQ92523 772 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 C19orf43Q9BQ61 176 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 TMEM121Q9BTD3 319 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 EPN3Q9H201 632 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 MVB12BQ9H7P6 319 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 ARNT2Q9HBZ2 717 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 NLE1Q9NVX2 485 aaPredicted RBP17.05■□□□□ 0.32
COL7A1-206ENST00000466591 IRAK4Q9NWZ3 460 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 TP53TG5Q9Y2B4 290 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 REXO2Q9Y3B8 237 aaKnown RBP17.05■□□□□ 0.32
COL7A1-206ENST00000466591 KCNMB2Q9Y691 235 aa17.05■□□□□ 0.32
COL7A1-206ENST00000466591 GOLGA6L3A6NEY3 463 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 C2orf74A8MZ97 194 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 LDB2O43679 373 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 KDM1AO60341 852 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 IFNB1P01574 187 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 FTH1P02794 183 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 GSTM1P09488 218 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 MSNP26038 577 aaKnown RBP17.04■□□□□ 0.32
COL7A1-206ENST00000466591 CASRP41180 1078 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 KPNA2P52292 529 aaKnown RBP17.04■□□□□ 0.32
COL7A1-206ENST00000466591 GSDMDP57764 484 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 GSTM4Q03013 218 aa17.04■□□□□ 0.32
COL7A1-206ENST00000466591 KLRB1Q12918 225 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms