RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	ARSB	P15848	533 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MX1	P20591	662 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CTNNB1	P35222	781 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CPOX	P36551	454 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HDAC4	P56524	1084 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RPS3A	P61247	264 aa	Known RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CCDC173	Q0VFZ6	552 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TMEM115	Q12893	351 aa	Predicted RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SYCP1	Q15431	976 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	GSTA3	Q16772	222 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TTC19	Q6DKK2	380 aa	Predicted RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DSTYK	Q6XUX3	929 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	C15orf52	Q6ZUT6	534 aa	Known RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	C1QL2	Q7Z5L3	287 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HSCB	Q8IWL3	235 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PARP16	Q8N5Y8	322 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	VN1R2	Q8NFZ6	395 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ASB5	Q8WWX0	329 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SMG7	Q92540	1137 aa	Known RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	C7orf26	Q96N11	449 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SIL1	Q9H173	461 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MAP3K20	Q9NYL2	800 aa	Known RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NCKIPSD	Q9NZQ3	722 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RSPH14	Q9UHP6	348 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	BLOC1S6	Q9UL45	172 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MKLN1	Q9UL63	735 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PA2G4	Q9UQ80	394 aa	Known RBP	5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PSAT1	Q9Y617	370 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	AKAP9	Q99996	3911 aa		5.05	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MROH7-TTC4	A0A0A0MT08	1334 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	WDR81	Q562E7	1941 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	LRRC53	A6NM62	1247 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278		B4DGG1	531 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NPIPB11	E5RHQ5	1161 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278		H0Y626	953 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TNFRSF13B	O14836	293 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	LDB2	O43679	373 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	USO1	O60763	962 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ERLIN1	O75477	346 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CABYR	O75952	493 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MTA2	O94776	668 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	REC8	O95072	547 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CSPG5	O95196	566 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TRIM16	O95361	564 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	LINC00271	P0C7V0	271 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SUPT20HL2	P0C7V6	817 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TDGF1	P13385	188 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HOXB2	P14652	356 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ITGAX	P20702	1163 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TBXAS1	P24557	533 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MSN	P26038	577 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PTGER1	P34995	402 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	IL15	P40933	162 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PRPH	P41219	470 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CLK1	P49759	484 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ENTPD1	P49961	510 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RASSF2	P50749	326 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	EIF3B	P55884	814 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TCP10	Q12799	353 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	BECN1	Q14457	450 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	RNPS1	Q15287	305 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MAPRE1	Q15691	268 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TCTN1	Q2MV58	587 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ESCO2	Q56NI9	601 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NCAPH2	Q6IBW4	605 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	APOBEC3H	Q6NTF7	200 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TSSK4	Q6SA08	328 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TMTC3	Q6ZXV5	915 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MON1B	Q7L1V2	547 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	LRRC49	Q8IUZ0	686 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	DENND6A	Q8IWF6	608 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MB21D2	Q8IYB1	491 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	ANKRD52	Q8NB46	1076 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	FAM76A	Q8TAV0	307 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	WBP1	Q96G27	269 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	VCPIP1	Q96JH7	1222 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	NECTIN4	Q96NY8	510 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	FCRL4	Q96PJ5	515 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MXRA8	Q9BRK3	442 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	H2AFJ	Q9BTM1	129 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	FAM234A	Q9H0X4	552 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CATSPERB	Q9H7T0	1116 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	PLAC1	Q9HBJ0	212 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	INTS6	Q9UL03	887 aa	Known RBP	5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CARD8	Q9Y2G2	431 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	JRKL	Q9Y4A0	524 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	CAPN7	Q9Y6W3	813 aa		5.04	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MROH5	Q6ZUA9	1318 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	SDK1	Q7Z5N4	2213 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278		A0A087X0M5	115 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278		A0A1B0GX30	115 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	TRIM64C	A6NLI5	447 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278		F8VZ95	297 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	MS4A18	H0YCH9	400 aa		5.03	□□□□□ -1.6
CACNA1C-223	ENST00000465278	BCAT2	O15382	392 aa	Predicted RBP	5.03	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms