RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 MFSD5Q6N075 450 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 BTN2A1Q7KYR7 527 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 PRDM8Q9NQV8 689 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 PRR5P85299 388 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 GPR33Q49SQ1 333 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 VPS26BQ4G0F5 336 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 DRICH1Q6PGQ1 229 aaPredicted RBP12.63□□□□□ -0.39
NUP58-206ENST00000463407 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 OR2T12Q8NG77 320 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 SNRNP27Q8WVK2 155 aaKnown RBP12.63□□□□□ -0.39
NUP58-206ENST00000463407 MYDGFQ969H8 173 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 PTGFRNQ9P2B2 879 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 TMEM98Q9Y2Y6 226 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 WWP2O00308 870 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 CLDN7O95471 211 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 SAGP10523 405 aaPredicted RBP12.63□□□□□ -0.39
NUP58-206ENST00000463407 SCNN1AP37088 669 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 CCNHP51946 323 aaPredicted RBP12.63□□□□□ -0.39
NUP58-206ENST00000463407 C22orf39Q6P5X5 142 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 AMIGO2Q86SJ2 522 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 SLC35F5Q8WV83 523 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 CCDC28BQ9BUN5 200 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 ARL8BQ9NVJ2 186 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 CDC14AQ9UNH5 594 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 RGPD2P0DJD1 1756 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 A8MUA0 341 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 IL1R2P27930 398 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 CSTF2P33240 577 aaKnown RBP eCLIP12.63□□□□□ -0.39
NUP58-206ENST00000463407 PSMD4P55036 377 aaKnown RBP12.63□□□□□ -0.39
NUP58-206ENST00000463407 HEPACAMQ14CZ8 416 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
NUP58-206ENST00000463407 HCAR2Q8TDS4 363 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 TMEM209Q96SK2 561 aa12.63□□□□□ -0.39
NUP58-206ENST00000463407 ELAC1Q9H777 363 aaKnown RBP12.63□□□□□ -0.39
NUP58-206ENST00000463407 G3V2T6 193 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 GPR32O75388 356 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
NUP58-206ENST00000463407 FOSL2P15408 326 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 CCKBRP32239 447 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 C17orf99Q6UX52 265 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 ZNF540Q8NDQ6 660 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 NUP188Q5SRE5 1749 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 MED26O95402 600 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 GNAZP19086 355 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 CHN2P52757 468 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 PITRM1Q5JRX3 1037 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 RALGPS2Q86X27 583 aaPredicted RBP12.62□□□□□ -0.39
NUP58-206ENST00000463407 TMEM145Q8NBT3 493 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 SMPDL3BQ92485 455 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 ESAMQ96AP7 390 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 SAMD4AQ9UPU9 718 aaKnown RBP12.62□□□□□ -0.39
NUP58-206ENST00000463407 TP73O15350 636 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 COCHO43405 550 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 TIMP1P01033 207 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 CCNA2P20248 432 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 QPCTQ16769 361 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 ABRAXAS1Q6UWZ7 409 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 CYP2U1Q7Z449 544 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 PCDHGA11Q9Y5H2 935 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 PIRO00625 290 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 OC90Q02509 493 aaPredicted RBP12.62□□□□□ -0.39
NUP58-206ENST00000463407 KLF10Q13118 480 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 VWA5B1Q5TIE3 1220 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 FAM91A1Q658Y4 838 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 CPNE8Q86YQ8 564 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 PPM1MQ96MI6 270 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 ENTPD5O75356 428 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 HNRNPA1P09651 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUP58-206ENST00000463407 CYP4B1P13584 511 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 RPL10P27635 214 aaKnown RBP12.62□□□□□ -0.39
NUP58-206ENST00000463407 HCAR3P49019 387 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 KCT2Q8NC54 265 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 NEK7Q8TDX7 302 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 KLHDC7BQ96G42 594 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 NDC1Q9BTX1 674 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 TDRD1Q9BXT4 1180 aaKnown RBP12.62□□□□□ -0.39
NUP58-206ENST00000463407 CRTAC1Q9NQ79 661 aa12.62□□□□□ -0.39
NUP58-206ENST00000463407 ZNF624Q9P2J8 865 aaPredicted RBP12.62□□□□□ -0.39
NUP58-206ENST00000463407 A0A0J9YVX5 310 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 WFS1O76024 890 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 RYKP34925 604 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 ARL13AQ5H913 290 aaPredicted RBP12.61□□□□□ -0.39
NUP58-206ENST00000463407 REP15Q6BDI9 236 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 KIAA0930Q6ICG6 404 aaPredicted RBP12.61□□□□□ -0.39
NUP58-206ENST00000463407 PTCHD4Q6ZW05 846 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 MPP5Q8N3R9 675 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 NCSTNQ92542 709 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 C7orf26Q96N11 449 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 HBEGFQ99075 208 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 GPR62Q9BZJ7 368 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 CYBAP13498 195 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 PLGLB1Q02325 96 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 TMCO2Q7Z6W1 182 aaPredicted RBP12.61□□□□□ -0.39
NUP58-206ENST00000463407 AGAP11Q8TF27 550 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 MIPEPQ99797 713 aa12.61□□□□□ -0.39
NUP58-206ENST00000463407 DAPK2Q9UIK4 370 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms