RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GOLGA8T	H3BQL2	631 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	DNALI1	O14645	258 aa	Predicted RBP	12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	C9	P02748	559 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	SLC35G4	P0C7Q5	338 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	ITGB6	P18564	788 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	XRCC1	P18887	633 aa	Predicted RBP	12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	FOXN2	P32314	431 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	ATP1A2	P50993	1020 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	MC2R	Q01718	297 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	KRT33B	Q14525	404 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	BRD3	Q15059	726 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	SYTL3	Q4VX76	610 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	AARS2	Q5JTZ9	985 aa	Known RBP	12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	LYPLAL1	Q5VWZ2	237 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	ZNF449	Q6P9G9	518 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	PCGF5	Q86SE9	256 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	LDB1	Q86U70	411 aa	Predicted RBP	12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	PIANP	Q8IYJ0	282 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	CFAP206	Q8IYR0	622 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	MPP5	Q8N3R9	675 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	MFSD3	Q96ES6	412 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	SERPINB12	Q96P63	405 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	SLC12A9	Q9BXP2	914 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	IMP3	Q9NV31	184 aa	Known RBP	12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	WDR70	Q9NW82	654 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	SIDT1	Q9NXL6	827 aa	Known RBP	12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	SLC39A1	Q9NY26	324 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	PCYOX1	Q9UHG3	505 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	BSN	Q9UPA5	3926 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	MYO18B	Q8IUG5	2567 aa		12.44	□□□□□ -0.42
FDPS-204	ENST00000461507	SDR42E2	A6NKP2	422 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	OR52A4P	A6NMU1	304 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	EFCAB7	A8K855	629 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	EFCAB8	A8MWE9	144 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507		F8W8V4	182 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	VAPB	O95292	243 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	MPST	P25325	297 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	NSG1	P42857	185 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	CSE1L	P55060	971 aa	Known RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	CKAP4	Q07065	602 aa	Known RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	BOP1	Q14137	746 aa	Known RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	DHX34	Q14147	1143 aa	Known RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	PLCL1	Q15111	1095 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	BBS9	Q3SYG4	887 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	SNAP47	Q5SQN1	464 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	AGAP9	Q5VTM2	703 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	WASH2P	Q6VEQ5	465 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	C11orf96	Q7Z7L8	435 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	CAND1	Q86VP6	1230 aa	Known RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	CLDN19	Q8N6F1	224 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	HM13	Q8TCT9	377 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	C12orf66	Q96MD2	445 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	C19orf43	Q9BQ61	176 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	ZPBP	Q9BS86	351 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	WWP1	Q9H0M0	922 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	DPH5	Q9H2P9	285 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	WASH6P	Q9NQA3	447 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	FBXO8	Q9NRD0	319 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	OGFR	Q9NZT2	677 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	SOX13	Q9UN79	622 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	NEU2	Q9Y3R4	380 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	CFAP20	Q9Y6A4	193 aa	Known RBP	12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	TENM4	Q6N022	2769 aa		12.43	□□□□□ -0.42
FDPS-204	ENST00000461507	TRBV5-4	A0A0C4DH59	114 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	MGAT4D	A6NG13	374 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507		J3QKU1	62 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	QSOX1	O00391	747 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	PFDN6	O15212	129 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	TOX3	O15405	576 aa	Predicted RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	CD3EAP	O15446	510 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	OR1I1	O60431	355 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	RAD1	O60671	282 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	KCNJ13	O60928	360 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	NDUFS3	O75489	264 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	FTH1	P02794	183 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	OR56A5	P0C7T3	313 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	MLN	P12872	115 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	BRAF	P15056	766 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	AMD1	P17707	334 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	PTGIR	P43119	386 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	PRLHR	P49683	370 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	DMPK	Q09013	629 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	THOC5	Q13769	683 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	ITIH4	Q14624	930 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	BCL7A	Q4VC05	210 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	DNAJC21	Q5F1R6	531 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	DCAF12	Q5T6F0	453 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	ANKS6	Q68DC2	871 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	PTRHD1	Q6GMV3	140 aa	Known RBP	12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	ABRAXAS1	Q6UWZ7	409 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	CERS6	Q6ZMG9	384 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	TMEM26	Q6ZUK4	368 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	FAM129C	Q86XR2	697 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	NAT8L	Q8N9F0	302 aa		12.42	□□□□□ -0.42
FDPS-204	ENST00000461507	ZSCAN1	Q8NBB4	408 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms