RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 MICALCLQ6ZW33 695 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 MARK2Q7KZI7 788 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 MAMDC2Q7Z304 686 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 NXPE1Q8N323 547 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 TAB3Q8N5C8 712 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 RASGEF1AQ8N9B8 481 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 CPT1CQ8TCG5 803 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 MAGOHBQ96A72 148 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 AHCYL2Q96HN2 611 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 LINC00615Q96LM1 132 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 ZNF778Q96MU6 729 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 APMAPQ9HDC9 416 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 WASH6PQ9NQA3 447 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 TREX1Q9NSU2 369 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 PIH1D1Q9NWS0 290 aaKnown RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 PCYOX1Q9UHG3 505 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 PRKAB1Q9Y478 270 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 MAP4K5Q9Y4K4 846 aa13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 MN1Q10571 1320 aaPredicted RBP13.37□□□□□ -0.27
SCAMP4-206ENST00000460767 CCL22O00626 93 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 POLR1CO15160 346 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 CDK14O94921 469 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 ASMTLO95671 621 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 F8A1P23610 371 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 IVDP26440 423 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 FOXN2P32314 431 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 GPR33Q49SQ1 333 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 BCL7AQ4VC05 210 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 AGAP9Q5VTM2 703 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 IYDQ6PHW0 289 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 CCDC137Q6PK04 289 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 SNX20Q7Z614 316 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 CAND1Q86VP6 1230 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 PIANPQ8IYJ0 282 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 SLC37A2Q8TED4 501 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 CPT1BQ92523 772 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 SLC38A3Q99624 504 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 NAPGQ99747 312 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 CTRCQ99895 268 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 ASB8Q9H765 288 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 SUDS3Q9H7L9 328 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 MLXIPLQ9NP71 852 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 SARS2Q9NP81 518 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 ZNHIT2Q9UHR6 403 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 KCND3Q9UK17 655 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 TCAF1Q9Y4C2 921 aa13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 PCDHGA9Q9Y5G4 932 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 DNMT3AQ9Y6K1 912 aaPredicted RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 UTP20O75691 2785 aaKnown RBP13.36□□□□□ -0.27
SCAMP4-206ENST00000460767 TEP1Q99973 2627 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 HEATR9A2RTY3 570 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 KMOO15229 486 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 TP73O15350 636 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 KCNJ13O60928 360 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 TMEM63AO94886 807 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 KRT14P02533 472 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 PDGFAP04085 211 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 F3P13726 295 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 BRAFP15056 766 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 ZNF7P17097 686 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 ADRA1DP25100 572 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 MC4RP32245 332 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 DCTP40126 519 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 PTGIRP43119 386 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 CDKN1CP49918 316 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 RIPPLY3P57055 190 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 UBE2IP63279 158 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 CCDC38Q502W7 563 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 TSTD2Q5T7W7 516 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 ANKRD22Q5VYY1 191 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 LRRC8BQ6P9F7 803 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 ABRAXAS1Q6UWZ7 409 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 CHST15Q7LFX5 561 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 LRRTM4Q86VH4 590 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 MCUQ8NE86 351 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 SEC14L1Q92503 715 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 SH3KBP1Q96B97 665 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 ZNF514Q96K75 400 aaPredicted RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 KIFC1Q9BW19 673 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 STN1Q9H668 368 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 TLK1Q9UKI8 766 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 MRPS18BQ9Y676 258 aaKnown RBP13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
SCAMP4-206ENST00000460767 TTLL8A6PVC2 850 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 TOX3O15405 576 aaPredicted RBP13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 C9P02748 559 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 FURINP09958 794 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 PRSS56P0CW18 603 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 ACP5P13686 325 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 ACRV1P26436 265 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 VARSP26640 1264 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 ARNTP27540 789 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 DLSTP36957 453 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 PRLHRP49683 370 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 ETF1P62495 437 aaKnown RBP13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 HHEXQ03014 270 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 PACS1Q6VY07 963 aa13.34□□□□□ -0.27
SCAMP4-206ENST00000460767 NLRP9Q7RTR0 991 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms