RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ACRV1P26436 265 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 TUBB4BP68371 445 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 TLE1Q04724 770 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 KLF1Q13351 362 aaPredicted RBP22.19■■□□□ 1.14
PTPN4-207ENST00000460162 TUBB2AQ13885 445 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 PTRH1Q86Y79 214 aaKnown RBP22.19■■□□□ 1.14
PTPN4-207ENST00000460162 CFAP206Q8IYR0 622 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 LILRA3Q8N6C8 439 aaPredicted RBP22.19■■□□□ 1.14
PTPN4-207ENST00000460162 ACVR1CQ8NER5 493 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 CT55Q8WUE5 264 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 BAG1Q99933 345 aaPredicted RBP22.19■■□□□ 1.14
PTPN4-207ENST00000460162 TUBB2BQ9BVA1 445 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 COG4Q9H9E3 785 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 BTRCQ9Y297 605 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 KCNMB2Q9Y691 235 aa22.19■■□□□ 1.14
PTPN4-207ENST00000460162 PIKFYVEQ9Y2I7 2098 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 OR6C74A6NCV1 312 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 CCL22O00626 93 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 KATNA1O75449 491 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 POLBP06746 335 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 KIF5AQ12840 1032 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 PRKAA1Q13131 559 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 KRT33BQ14525 404 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 CERS6Q6ZMG9 384 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 FAM71DQ8N9W8 422 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 OR8K5Q8NH50 307 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 SEC14L1Q92503 715 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 ABHD17AQ96GS6 310 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 FAM96AQ9H5X1 160 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 NLE1Q9NVX2 485 aaPredicted RBP22.18■■□□□ 1.14
PTPN4-207ENST00000460162 POMT2Q9UKY4 750 aa22.18■■□□□ 1.14
PTPN4-207ENST00000460162 CPNE3O75131 537 aaKnown RBP22.17■■□□□ 1.14
PTPN4-207ENST00000460162 CREG1O75629 220 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 GSTM1P09488 218 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 KPNA2P52292 529 aaKnown RBP22.17■■□□□ 1.14
PTPN4-207ENST00000460162 GSTM4Q03013 218 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 ERV3-1Q14264 604 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 ZNF658BQ4V348 819 aaPredicted RBP22.17■■□□□ 1.14
PTPN4-207ENST00000460162 LACTB2Q53H82 288 aaPredicted RBP22.17■■□□□ 1.14
PTPN4-207ENST00000460162 TMTC4Q5T4D3 741 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 SERPINA9Q86WD7 417 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 TMEM139Q8IV31 216 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 SLC35B2Q8TB61 432 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 OR52A5Q9H2C5 316 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 LATS2Q9NRM7 1088 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 SOHLH2Q9NX45 425 aa22.17■■□□□ 1.14
PTPN4-207ENST00000460162 PACSIN2Q9UNF0 486 aaPredicted RBP22.17■■□□□ 1.14
PTPN4-207ENST00000460162 IFRD1O00458 451 aaPredicted RBP22.16■■□□□ 1.14
PTPN4-207ENST00000460162 DDX3YO15523 660 aaKnown RBP22.16■■□□□ 1.14
PTPN4-207ENST00000460162 METTL18O95568 372 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 AP2A1O95782 977 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 CASRP41180 1078 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 CD151P48509 253 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 GDF10P55107 478 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 CACNG1Q06432 222 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 RPA4Q13156 261 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 ZRANB3Q5FWF4 1079 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 STYXQ8WUJ0 223 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 ZNF501Q96CX3 271 aaPredicted RBP22.16■■□□□ 1.14
PTPN4-207ENST00000460162 GPR87Q9BY21 358 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 TWSG1Q9GZX9 223 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 EPN3Q9H201 632 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 ACTL8Q9H568 366 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 FANCEQ9HB96 536 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 ZNF71Q9NQZ8 489 aaPredicted RBP22.16■■□□□ 1.14
PTPN4-207ENST00000460162 C1GALT1Q9NS00 363 aa22.16■■□□□ 1.14
PTPN4-207ENST00000460162 CDC14CA4D256 554 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 PSMD3O43242 534 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 SCRG1O75711 98 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 FTCDO95954 541 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 FURINP09958 794 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 POLR2CP19387 275 aaPredicted RBP22.15■■□□□ 1.14
PTPN4-207ENST00000460162 ARCN1P48444 511 aaKnown RBP22.15■■□□□ 1.14
PTPN4-207ENST00000460162 CDKN1CP49918 316 aaPredicted RBP22.15■■□□□ 1.14
PTPN4-207ENST00000460162 PMS2P54278 862 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 POU6F1Q14863 301 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 ZNF449Q6P9G9 518 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 TMEM126BQ8IUX1 230 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 LCN9Q8WX39 176 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 SRMSQ9H3Y6 488 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 MVB12BQ9H7P6 319 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 KCND1Q9NSA2 647 aa22.15■■□□□ 1.14
PTPN4-207ENST00000460162 R3HDM2Q9Y2K5 976 aaKnown RBP22.15■■□□□ 1.14
PTPN4-207ENST00000460162 MKRN2OSH3BPM6 223 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 RFPL1O75677 317 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 AP2A2O94973 939 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 NTRK1P04629 796 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 CDH3P22223 829 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 GPR19Q15760 415 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 SKIDA1Q1XH10 827 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 TAS2R42Q7RTR8 314 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 LINC00523Q86TU6 105 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 OR4E2Q8NGC2 313 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 CDKN2AIPNLQ96HQ2 116 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 HES6Q96HZ4 224 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 LRFN5Q96NI6 719 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 FERD3LQ96RJ6 166 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 TMEM121Q9BTD3 319 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 SYTL2Q9HCH5 934 aa22.14■■□□□ 1.13
PTPN4-207ENST00000460162 PIPSLA2A3N6 862 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms