RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DNAJB14Q8TBM8 379 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ULK4Q96C45 1275 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 C11orf49Q9H6J7 331 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 EGFL7Q9UHF1 273 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 TRPS1Q9UHF7 1281 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 IRAK3Q9Y616 596 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 C7orf72A4D263 438 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 ZBBXA8MT70 800 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 TIPRLO75663 272 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 UGT2B4P06133 528 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 GPIP06744 558 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 SMIM18P0DKX4 95 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 G6PDP11413 515 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 PSMA4P25789 261 aaKnown RBP16.37■□□□□ 0.21
CCDC43-202ENST00000457422 GRIA2P42262 883 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 B4GALNT1Q00973 533 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 AP5B1Q2VPB7 878 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 ATP13A5Q4VNC0 1218 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 RABL3Q5HYI8 236 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 C6orf52Q5T4I8 152 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 TTC23LQ6PF05 361 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 DPY19L3Q6ZPD9 716 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 GALNT13Q8IUC8 556 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 SPPL2CQ8IUH8 684 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 ZNF557Q8N988 423 aaPredicted RBP16.37■□□□□ 0.21
CCDC43-202ENST00000457422 FAM110BQ8TC76 370 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 OSBPL11Q9BXB4 747 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 ABCG8Q9H221 673 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 ZNF696Q9H7X3 374 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 ZMYM5Q9UJ78 669 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 ANGPTL3Q9Y5C1 460 aa16.37■□□□□ 0.21
CCDC43-202ENST00000457422 NEDD8-MDP1E9PL57 170 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 TNFAIP8O95379 198 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 FGF19O95750 216 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 C1SP09871 688 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 PABPC4LP0CB38 370 aaKnown RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 EBLN1P0CF75 366 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 GDF5P43026 501 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 LIPEQ05469 1076 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 GBX1Q14549 363 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 TEAD2Q15562 447 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 LRRC73Q5JTD7 316 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 NANOGP8Q6NSW7 305 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 PPP4R4Q6NUP7 873 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 AMIGO2Q86SJ2 522 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 CHERPQ8IWX8 916 aaKnown RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 ADGRG5Q8IZF4 528 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 PPWD1Q96BP3 646 aaKnown RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 CNBD2Q96M20 576 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 TSC22D3Q99576 134 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 TCF25Q9BQ70 676 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 EMILIN2Q9BXX0 1053 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 NANOGQ9H9S0 305 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 WASH3PC4AMC7 463 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 RGS14O43566 566 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 PABPC1P11940 636 aaKnown RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 IL10P22301 178 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 HTR1EP28566 365 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 CASP2P42575 452 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 PIK3CGP48736 1102 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 TXNL4AP83876 142 aaKnown RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 MAD2L1Q13257 205 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 DMC1Q14565 340 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 NRF1Q16656 503 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 RFTN2Q52LD8 501 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 HABP4Q5JVS0 413 aaKnown RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 TBCELQ5QJ74 424 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 MBOAT1Q6ZNC8 495 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 TRIM46Q7Z4K8 759 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 HID1Q8IV36 788 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 PLPP6Q8IY26 295 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 PACRGLQ8N7B6 248 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 CHST14Q8NCH0 376 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 KCTD14Q9BQ13 255 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 EPB41L1Q9H4G0 881 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 BRD9Q9H8M2 597 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 AGPAT4Q9NRZ5 378 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 INTS7Q9NVH2 962 aaKnown RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 SLAMF8Q9P0V8 285 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 SLCO3A1Q9UIG8 710 aa16.36■□□□□ 0.21
CCDC43-202ENST00000457422 POLR3HQ9Y535 204 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-202ENST00000457422 ZFC3H1O60293 1989 aaKnown RBP16.35■□□□□ 0.21
CCDC43-202ENST00000457422 TCRBV5S2A0A599 114 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 HIDE1A8MVS5 230 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 SLC28A1O00337 649 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 AKAP10O43572 662 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 FESP07332 822 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 ANXA5P08758 320 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 FAM58BPP0C7Q3 252 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 OR56A5P0C7T3 313 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 EPB42P16452 691 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 SPINT3P49223 89 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 ERVFC1P60507 584 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 MYBPC1Q00872 1141 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 AASDHQ4L235 1098 aaPredicted RBP16.35■□□□□ 0.21
CCDC43-202ENST00000457422 INTS11Q5TA45 600 aaKnown RBP16.35■□□□□ 0.21
CCDC43-202ENST00000457422 PLPP4Q5VZY2 271 aa16.35■□□□□ 0.21
CCDC43-202ENST00000457422 DLEU7Q6UYE1 221 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms